DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BACA2 (S-adenosylmethionine synthetase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metK PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.833e-15
Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            D  L+ DP ++VACET   T +V+V GEITT   VD  K VR+T + IG+  A  G DA+ C VL +I++QS +IA  V   L  R
Sbjct:   31 DEILKNDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRETIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAR 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_THEM4 (S-adenosylmethionine synthetase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=metK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.006e-15
Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEI 271
            DA LEQDP S+VA ET   T + +V GE+TT+A VD + +VR T   IG+  A  G D + C VL +I  QSP+IA  V   L  +  E+
Sbjct:   28 DAMLEQDPRSRVAVETLVTTGIAIVSGEVTTRAYVDIQDIVRKTIMEIGYTRAKYGFDGETCAVLSSIHSQSPDIAMGVDKALEAKEGEL 117          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_POLSJ (S-adenosylmethionine synthetase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=metK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.006e-15
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA  +QDP S+VA ET   T +V++ GEITT A VDY +V RDT + IG+ + + G+D   C VLV  +KQS +IAQ V
Sbjct:   30 DAIFKQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_DELAS (S-adenosylmethionine synthetase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=metK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.006e-15
Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA   QDP S+VA ET   T +V++ GEITT A VDY +V RDT + IG+ + D G+D   C VLV  +KQS +IAQ V
Sbjct:   30 DAIFAQDPYSRVAAETLTNTGLVVLAGEITTGANVDYIQVARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSQDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_CLAMS (S-adenosylmethionine synthetase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=metK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.006e-15
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            DA L QDP S+ A ET   T +V V GE+TT   VD  ++VRD  R IG+ S++VG D   C V V+I  QSP+IAQ V  +   R
Sbjct:   30 DALLTQDPSSRAAVETLVTTGLVHVAGEVTTSGYVDIPQIVRDRIRDIGYDSSEVGFDGSNCGVTVSIGAQSPDIAQGVDRSYESR 115          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BURP8 (S-adenosylmethionine synthetase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.006e-15
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  S+VA ET   T +V++ GEITT A VDY +V R+T + IG+ + D G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYSRVAAETLCNTGLVVLAGEITTTANVDYIQVARETIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BACSU (S-adenosylmethionine synthetase OS=Bacillus subtilis GN=metK PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 5.006e-15
Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            D  L++DP ++VACET   T +V+V GEITT   VD  K VR T + IG+  A  G DA+ C VL +I++QS +IA  V   L  R
Sbjct:   31 DEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRQTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAR 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ACIAC (S-adenosylmethionine synthetase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=metK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.006e-15
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA   +DP S+VA ET   T +V++ GEITT A VDY +V RDT + IG+ + D G+D   C VLV  +KQS +IAQ V
Sbjct:   30 DAIFREDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSNDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_THEAB (S-adenosylmethionine synthetase OS=Thermosipho africanus (strain TCF52B) GN=metK PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.538e-15
Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEI 271
            DA LEQDP+S+VA ET   T + +V GE+TT+A VD + +VR T   IG+  A  G D + C VL +I  QSP+IA  V   L  +  E+
Sbjct:   28 DAMLEQDPKSRVAVETLVTTGIAIVSGEVTTRAYVDIQDIVRKTILDIGYTRAKYGFDGETCAVLSSIHSQSPDIALGVDKALEAKEGEL 117          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_CLAM3 (S-adenosylmethionine synthetase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=metK PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.538e-15
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            DA L QDP S+ A ET   T +V V GE+TT   VD  ++VRD  R IG+ S++VG D   C V V+I  QSP+IAQ V  +   R
Sbjct:   30 DALLTQDPTSRAAVETLVTTGLVHVAGEVTTSGYVDIPQIVRDRIRDIGYDSSEVGFDGSNCGVTVSIGAQSPDIAQGVDRSYESR 115          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BACA23.833e-1546.51S-adenosylmethionine synthetase OS=Bacillus amylol... [more]
METK_THEM45.006e-1545.56S-adenosylmethionine synthetase OS=Thermosipho mel... [more]
METK_POLSJ5.006e-1550.63S-adenosylmethionine synthetase OS=Polaromonas sp.... [more]
METK_DELAS5.006e-1551.90S-adenosylmethionine synthetase OS=Delftia acidovo... [more]
METK_CLAMS5.006e-1547.67S-adenosylmethionine synthetase OS=Clavibacter mic... [more]
METK_BURP85.006e-1551.90S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_BACSU5.006e-1546.51S-adenosylmethionine synthetase OS=Bacillus subtil... [more]
METK_ACIAC5.006e-1550.63S-adenosylmethionine synthetase OS=Acidovorax aven... [more]
METK_THEAB6.538e-1545.56S-adenosylmethionine synthetase OS=Thermosipho afr... [more]
METK_CLAM36.538e-1547.67S-adenosylmethionine synthetase OS=Clavibacter mic... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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