DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BURXL (S-adenosylmethionine synthetase OS=Burkholderia xenovorans (strain LB400) GN=metK PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.538e-15
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  S+VA ET   T +V++ GEITT A VDY +V R+T + IG+ + D G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYSRVAAETLCNTGLVVLAGEITTTANVDYIQVARNTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BURPP (S-adenosylmethionine synthetase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metK PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.538e-15
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  S+VA ET   T +V++ GEITT A VDY +V R+T + IG+ + D G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYSRVAAETLCNTGLVVLAGEITTTANVDYIQVARNTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_AMOPS (S-adenosylmethionine synthetase OS=Amoeba proteus symbiotic bacterium GN=metK PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.538e-15
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSK 256
            DA L +DP ++VACET  KT MV+V GEITT A VD + + R+  + IG+ S+D+G D   C VL  I KQS +IAQ V    +K
Sbjct:   29 DAILAKDPLARVACETFVKTGMVLVGGEITTSAWVDVETITREVIKDIGYNSSDMGFDWASCSVLSAIGKQSLDIAQGVDNRETK 113          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ACAM1 (S-adenosylmethionine synthetase OS=Acaryochloris marina (strain MBIC 11017) GN=metK PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.538e-15
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEE 268
            DA L QDP S+VA E    T +V++ GEITTKA+V++  +VR     IG+  +D G  A+ C VLV +++QSP+IAQ V      R E+
Sbjct:   30 DALLSQDPASRVAAEVVVNTGLVLLTGEITTKAQVNFVDLVRQKITEIGYTDSDNGFAANSCSVLVALDEQSPDIAQGVDSAQETREEK 118          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_STRS7 (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            DA L +DPE+ VA ETC  T  V VFGEI+T A VD  +VVRDT   IG+  A+ G  A+   V  ++ +QSP+IAQ V+  L  R
Sbjct:   30 DAILAKDPEAHVAAETCVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEAR 115          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_STREM (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            DA L +DPE+ VA ETC  T  V VFGEI+T A VD  +VVRDT   IG+  A+ G  A+   V  ++ +QSP+IAQ V+  L  R
Sbjct:   30 DAILAKDPEAHVAAETCVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEAR 115          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_STRE4 (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. equi (strain 4047) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            DA L +DPE+ VA ETC  T  V VFGEI+T A VD  +VVRDT   IG+  A+ G  A+   V  ++ +QSP+IAQ V+  L  R
Sbjct:   30 DAILAKDPEAHVAAETCVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEAR 115          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  ++VA ET   T +V++ GEITT A VDY +V RDT + IG+ + + G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PROMM (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9313) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADV-GLDADKCKVLVNIEKQSPEIAQSVH 241
            DA L QDP S+VACET   T + ++ GE+T+ A+VD+  +VR+  R IG+  A   G DA  C VLV +++QSP+IAQ V+
Sbjct:   29 DALLAQDPSSRVACETVVNTGLCLITGEVTSNAQVDFIHLVRNVIREIGYSGARAGGFDATSCAVLVALDQQSPDIAQGVN 109          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_METPP (S-adenosylmethionine synthetase OS=Methylibium petroleiphilum (strain PM1) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA   QDP S+VA ET   T +V++ GEITT A VDY +V RDT + IG+ + + G+D   C VLV  +KQS +IAQ V
Sbjct:   30 DAIFAQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV 108          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BURXL6.538e-1551.90S-adenosylmethionine synthetase OS=Burkholderia xe... [more]
METK_BURPP6.538e-1551.90S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_AMOPS6.538e-1549.41S-adenosylmethionine synthetase OS=Amoeba proteus ... [more]
METK_ACAM16.538e-1544.94S-adenosylmethionine synthetase OS=Acaryochloris m... [more]
METK_STRS78.540e-1548.84S-adenosylmethionine synthetase OS=Streptococcus e... [more]
METK_STREM8.540e-1548.84S-adenosylmethionine synthetase OS=Streptococcus e... [more]
METK_STRE48.540e-1548.84S-adenosylmethionine synthetase OS=Streptococcus e... [more]
METK_RALEJ8.540e-1550.63S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_PROMM8.540e-1548.15S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_METPP8.540e-1550.63S-adenosylmethionine synthetase OS=Methylibium pet... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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