DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_HAEPS (S-adenosylmethionine synthetase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            D  L+QDP+++VACET  KT M +V GEITT A VD + + R     IG+  +D+G DA  C VL  I KQSP+I Q V
Sbjct:   29 DEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_DIAST (S-adenosylmethionine synthetase OS=Diaphorobacter sp. (strain TPSY) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA   QDP S+VA ET   T +V++ GEITT A VDY +V RDT + IG+ + + G+D   C VLV  +KQS +IAQ V
Sbjct:   30 DAIFTQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ACTPJ (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            D  L+QDP+++VACET  KT M +V GEITT A VD + + R     IG+  +D+G DA  C VL  I KQSP+I Q V
Sbjct:   29 DEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ACTP7 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            D  L+QDP+++VACET  KT M +V GEITT A VD + + R     IG+  +D+G DA  C VL  I KQSP+I Q V
Sbjct:   29 DEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ACTP2 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            D  L+QDP+++VACET  KT M +V GEITT A VD + + R     IG+  +D+G DA  C VL  I KQSP+I Q V
Sbjct:   29 DEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_STAHJ (S-adenosylmethionine synthetase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metK PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.115e-14
Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            D  L+ DP ++VACET   T M ++ GEI+T   VD  KVVR+T +GIG+  A  G D     VL  I++QSP+IAQ V   L  R
Sbjct:   31 DEILKDDPNARVACETTVTTGMALISGEISTSTYVDIPKVVRETIKGIGYTRAKYGYDYQTMAVLTAIDEQSPDIAQGVDKALEYR 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_RALSO (S-adenosylmethionine synthetase OS=Ralstonia solanacearum GN=metK PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.115e-14
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  ++VA ET   T +V++ GEITT A VDY  V R+T + IG+ + D G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYARVAAETLCNTGLVVLAGEITTSANVDYIHVARETIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_MARMS (S-adenosylmethionine synthetase OS=Marinomonas sp. (strain MWYL1) GN=metK PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.115e-14
Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L +DPE++VACET  KT MV+V GE+ T A VD +++ R   R IG+ S+D+G D + C V+  I KQS +IA  V
Sbjct:   30 DAILAEDPEARVACETLVKTGMVLVAGEVRTNAWVDIEEIARGVIREIGYNSSDMGFDWESCAVMNAIGKQSADIAVGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_IDILO (S-adenosylmethionine synthetase OS=Idiomarina loihiensis GN=metK PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.115e-14
Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA L +DP+++VACET  KT MV+V GEI+TKA VD + + R T + IG+  +D+G D   C VL  I KQS +I Q V       PEE G
Sbjct:   29 DAILAKDPKARVACETYVKTGMVLVGGEISTKAWVDVEDLARQTVKDIGYRHSDMGFDGASCAVLNAIGKQSGDINQGVD---RANPEEQG 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_HAEDU (S-adenosylmethionine synthetase OS=Haemophilus ducreyi GN=metK PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.115e-14
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            D  L+QDP+++VACET  KT M +V GEITT A VD + + R     IG+  +D+G DA  C VL  I KQSP+I Q V
Sbjct:   34 DEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVIYDIGYSHSDMGFDAHSCAVLNAIGKQSPDINQGV 112          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_HAEPS8.540e-1550.63S-adenosylmethionine synthetase OS=Haemophilus par... [more]
METK_DIAST8.540e-1550.63S-adenosylmethionine synthetase OS=Diaphorobacter ... [more]
METK_ACTPJ8.540e-1550.63S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP78.540e-1550.63S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP28.540e-1550.63S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_STAHJ1.115e-1446.51S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_RALSO1.115e-1450.63S-adenosylmethionine synthetase OS=Ralstonia solan... [more]
METK_MARMS1.115e-1449.37S-adenosylmethionine synthetase OS=Marinomonas sp.... [more]
METK_IDILO1.115e-1448.35S-adenosylmethionine synthetase OS=Idiomarina loih... [more]
METK_HAEDU1.115e-1450.63S-adenosylmethionine synthetase OS=Haemophilus duc... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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