DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_STAS1 (S-adenosylmethionine synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=metK PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.902e-14
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPE 265
            D  L+ DP ++VACET   T M ++ GEI+T   VD  KVVR+T + IG+  A  G D+    VL  I++QSP+IAQ V   L  R E
Sbjct:   31 DEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKEIGYTRAKFGYDSQTMAVLTAIDEQSPDIAQGVDTALEYRDE 118          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PROM3 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9303) GN=metK PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.902e-14
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADV-GLDADKCKVLVNIEKQSPEIAQSVH 241
            DA L QDP S+VACET   T + ++ GE+T+ ++VD+  +VR+  R IG+  A   G DA  C VLV +++QSP+IAQ V+
Sbjct:   29 DALLAQDPSSRVACETVVNTGLCLITGEVTSNSQVDFIHLVRNVIREIGYSGARAGGFDATSCAVLVALDQQSPDIAQGVN 109          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_CYAP4 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=metK PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.902e-14
Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVH 241
            DA L QDP+S+VA E    T +V++ GEIT++A+V+Y  +VR     IG+ SA+ G  A  C VLV +++QSP+IAQ V+
Sbjct:   30 DALLSQDPQSRVAAEVVVNTGLVLITGEITSQAQVNYVDLVRKKITEIGYTSAENGFCATSCAVLVALDEQSPDIAQGVN 109          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_AZOSE (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain EbN1) GN=metK PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.902e-14
Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVH 241
            DA L  DP+++VACET   T +V++ GEITT A  +Y+++ ++  R IG+ ++D+G D   C VL  I +QS +IAQ V+
Sbjct:   30 DAILATDPQARVACETLVSTGLVVISGEITTTAHPNYREIAQEVIRRIGYDNSDIGFDYKSCAVLAAINRQSADIAQGVN 109          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_THEEB (S-adenosylmethionine synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=metK PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.485e-14
Identity = 37/79 (46.84%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QDP+S+VA E    T +V++ GEITTKA+V+Y  + R     IG+  A+ G  A+ C VLV +++QSP+IA+ V
Sbjct:   28 DALLTQDPQSRVAAEVVVNTGLVLITGEITTKAQVNYVNLARQKIHEIGYTDANNGFAANSCAVLVALDEQSPDIARGV 106          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_RALME (S-adenosylmethionine synthetase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=metK PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.485e-14
Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  ++VA ET   T +V++ GEITT A VDY +V R+T + IG+ + + G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQVARETIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_MYCCT (S-adenosylmethionine synthetase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=metK PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.485e-14
Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            D  L+QD  +KVACE    TN +++ G+I++ A VDY++V RD  + IG+V    G++A+ CK+ + IE QSP+IAQ V
Sbjct:   33 DEVLKQDKNAKVACEVFTTTNYLLIGGQISSTAIVDYEQVARDVLKKIGYVDDAYGINANTCKIDIKIESQSPDIAQGV 111          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_DESHD (S-adenosylmethionine synthetase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=metK PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.485e-14
Identity = 41/90 (45.56%), Postives = 52/90 (57.78%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEI 271
            DA   +DP ++VACET   T +V+V GEITT   VD    VR T R IG+  A  G DAD C VL +I +QS +IA  V   L  +  E+
Sbjct:   29 DAIFAKDPNARVACETSVTTGLVLVSGEITTNCYVDIPSTVRQTIREIGYTRAKYGFDADTCAVLTSIGEQSADIALGVDRALEAKNGEM 118          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BIFLO (S-adenosylmethionine synthetase OS=Bifidobacterium longum GN=metK PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.485e-14
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            D  L QD  S VA ET A T + +VFGE+T++   D +  VR+T R IG+ S++VGLDAD C V+V I +QS EI Q V
Sbjct:   31 DDLLAQDSSSHVAVETSAATGVFLVFGEVTSEGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGV 109          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BIFLD (S-adenosylmethionine synthetase OS=Bifidobacterium longum (strain DJO10A) GN=metK PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.485e-14
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            D  L QD  S VA ET A T + +VFGE+T++   D +  VR+T R IG+ S++VGLDAD C V+V I +QS EI Q V
Sbjct:   31 DDLLAQDSSSHVAVETSAATGVFLVFGEVTSEGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGV 109          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAS11.902e-1445.45S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_PROM31.902e-1446.91S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_CYAP41.902e-1447.50S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_AZOSE1.902e-1443.75S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_THEEB2.485e-1446.84S-adenosylmethionine synthetase OS=Thermosynechoco... [more]
METK_RALME2.485e-1449.37S-adenosylmethionine synthetase OS=Ralstonia metal... [more]
METK_MYCCT2.485e-1445.57S-adenosylmethionine synthetase OS=Mycoplasma capr... [more]
METK_DESHD2.485e-1445.56S-adenosylmethionine synthetase OS=Desulfitobacter... [more]
METK_BIFLO2.485e-1450.63S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_BIFLD2.485e-1450.63S-adenosylmethionine synthetase OS=Bifidobacterium... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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