DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_XANC5 (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=metK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.245e-14
Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA L QD  ++VACET  KT + +V GE+TT A +D + + R     IG+ S+DVG D + C VL  I KQSP+I Q V     K PE+ G
Sbjct:   29 DAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQG 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_XANAC (S-adenosylmethionine synthetase OS=Xanthomonas axonopodis pv. citri GN=metK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.245e-14
Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA L QD  ++VACET  KT + +V GE+TT A +D + + R     IG+ S+DVG D + C VL  I KQSP+I Q V     K PE+ G
Sbjct:   29 DAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQG 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SYNFM (S-adenosylmethionine synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=metK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.245e-14
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVH 241
            DA + +D  ++VACET   T +  V GEITT + VD   ++R T +GIG+  + +G D   C V+ +I+KQSP+IAQ V+
Sbjct:   31 DAIITEDKTARVACETLVTTGLAFVAGEITTSSWVDIPDIIRSTIKGIGYNDSSMGFDWSTCAVITSIDKQSPDIAQGVN 110          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PSEFS (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain SBW25) GN=metK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.245e-14
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA + +D  ++VACET  KT + ++ GE+TT A VD +++VRD    IG+ S+DVG D   C V+  I KQSP+I Q V      +PE+ G
Sbjct:   30 DAIIAEDKFARVACETLVKTGVAIIAGEVTTTAWVDLEQIVRDVITDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQG 117          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.245e-14
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA L  DP ++VACET  KT + +V GEITT A VD + +VR   + I + S++VG D D C V+  I KQS +IAQ V     ++PE+ G
Sbjct:   30 DAILTDDPHARVACETMVKTGVAIVGGEITTSAWVDLEDLVRGVIKDIDYTSSEVGYDGDTCGVINIIGKQSVDIAQGVD---RQKPEDQG 117          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_FERNB (S-adenosylmethionine synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=metK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.245e-14
Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVH 241
            DA +EQDP+++VA ET   T + +V GE+TTKA VD + +VR T   IG+  A  G D + C VL +I  QSP+IA  V+
Sbjct:   28 DAIIEQDPKARVAVETLLTTGVAIVAGEVTTKAYVDVQDIVRKTVLDIGYTRAKYGFDGETCAVLSSIHSQSPDIALGVN 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_DESRM (S-adenosylmethionine synthetase OS=Desulfotomaculum reducens (strain MI-1) GN=metK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.245e-14
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEE 268
            D+ L +DP ++VACET   T +V+V GEI+ +  VD  KVVR+T   IG+  A  G D D C VL  I++QSP+IA  V   L  +  E
Sbjct:   29 DSILAKDPMARVACETFVTTGLVLVGGEISCQCYVDIPKVVRETILEIGYTRAKYGFDGDTCAVLTAIDEQSPDIAMGVDKALEAKTGE 117          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_STAES (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14
Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            D  L+ DP ++VACET   T M ++ GEI+T   VD  KVVR+T + IG+  A  G D+    VL  I++QSP+IAQ V   L  R
Sbjct:   31 DEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKDIGYTRAKYGYDSQTMAVLTAIDEQSPDIAQGVDKALEYR 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_STAEQ (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14
Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            D  L+ DP ++VACET   T M ++ GEI+T   VD  KVVR+T + IG+  A  G D+    VL  I++QSP+IAQ V   L  R
Sbjct:   31 DEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKDIGYTRAKYGYDSQTMAVLTAIDEQSPDIAQGVDKALEYR 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_RALPJ (S-adenosylmethionine synthetase OS=Ralstonia pickettii (strain 12J) GN=metK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  ++VA ET   T +V++ GEITT A VDY  V R+T + IG+ + + G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIHVARETIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV 108          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_XANC53.245e-1446.15S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANAC3.245e-1446.15S-adenosylmethionine synthetase OS=Xanthomonas axo... [more]
METK_SYNFM3.245e-1443.75S-adenosylmethionine synthetase OS=Syntrophobacter... [more]
METK_PSEFS3.245e-1443.96S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_MARAV3.245e-1446.15S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_FERNB3.245e-1447.50S-adenosylmethionine synthetase OS=Fervidobacteriu... [more]
METK_DESRM3.245e-1444.94S-adenosylmethionine synthetase OS=Desulfotomaculu... [more]
METK_STAES4.238e-1445.35S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAEQ4.238e-1445.35S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_RALPJ4.238e-1449.37S-adenosylmethionine synthetase OS=Ralstonia picke... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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