DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PROM4 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9211) GN=metK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14
Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADV-GLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QDP S+VACE    T + ++ GE+T+ A+VD+  +VR   + IG+  A   G DA+ C VLV ++KQSP+IA+ V
Sbjct:   29 DALLTQDPHSRVACEAVVNTGLCLITGEVTSTAEVDFINLVRSVIKEIGYKDAQAGGFDANSCAVLVALDKQSPDIAKGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_CHRSD (S-adenosylmethionine synthetase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA + +D +++VACET  KT + +V GEITT A VD + +VR     IG+ S+DVG D + C VL  I KQS +IAQ V      +PE+ G
Sbjct:   30 DAIIARDKQARVACETMVKTGVAIVAGEITTSAWVDLEDLVRRVINDIGYTSSDVGFDGNTCGVLNLIGKQSVDIAQGVD---RSKPEDQG 117          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SYNP2 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=metK PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.535e-14
Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L  DP S+VA E    T +V++ GE+TT+A V++ +V R   + IG+ +AD G  A+ C V+V +++QSP+IAQ V
Sbjct:   30 DAVLAADPSSRVAAEVVTNTGLVLITGELTTQANVNFIQVARQKIKEIGYTNADNGFSANSCSVMVALDEQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PSEMY (S-adenosylmethionine synthetase OS=Pseudomonas mendocina (strain ymp) GN=metK PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.535e-14
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA + QD  ++VA ET  KT + +V GE+TT A VD +++VRD    IG+ S+DVG D + C ++  I KQSP+I Q V      +PE+ G
Sbjct:   30 DAIIVQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICNIGYTSSDVGFDGNTCGIINIIGKQSPDINQGVD---RAKPEDQG 117          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_COLP3 (S-adenosylmethionine synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=metK PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.535e-14
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA + +D  ++VACET  KT + ++ GE++T A VD +K+ R+    IG+ S+DVG D   C ++  I +QSPEIAQ V       PEE G
Sbjct:   29 DAIIAKDKHARVACETMVKTGVAIISGEVSTNAWVDLEKLTRNVISDIGYTSSDVGFDGATCGIMNLIGQQSPEIAQGVD---RSNPEEQG 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_THET8 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.229e-14
Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVH 241
            DA + QD +++VA ET   T +V V GEITT+  VD   +VR T R +G+  A  G DAD C VL  I++QSP+IA  V+
Sbjct:   30 DALIAQDKKARVAAETLVTTGLVFVAGEITTEGYVDIPNLVRKTVREVGYTRAKYGFDADTCAVLTAIDEQSPDIAGGVN 109          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_THET2 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=metK PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.229e-14
Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVH 241
            DA + QD +++VA ET   T +V V GEITT+  VD   +VR T R +G+  A  G DAD C VL  I++QSP+IA  V+
Sbjct:   30 DALIAQDKKARVAAETLVTTGLVFVAGEITTEGYVDIPNLVRKTVREVGYTRAKYGFDADTCAVLTAIDEQSPDIAGGVN 109          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_THESQ (S-adenosylmethionine synthetase OS=Thermotoga sp. (strain RQ2) GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.229e-14
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLS-KRPEEI 271
            DA LEQDP S+VA ET   T +V++ GE+TT+A V+   + R T   IG+  A  G D + C VL +I  QSP+IA  V   L  K  EE+
Sbjct:   28 DAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEV 118          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_THEP1 (S-adenosylmethionine synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.229e-14
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLS-KRPEEI 271
            DA LEQDP S+VA ET   T +V++ GE+TT+A V+   + R T   IG+  A  G D + C VL +I  QSP+IA  V   L  K  EE+
Sbjct:   28 DAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEV 118          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_THEMA (S-adenosylmethionine synthetase OS=Thermotoga maritima GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.229e-14
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLS-KRPEEI 271
            DA LEQDP S+VA ET   T +V++ GE+TT+A V+   + R T   IG+  A  G D + C VL +I  QSP+IA  V   L  K  EE+
Sbjct:   28 DAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEV 118          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PROM44.238e-1446.25S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_CHRSD4.238e-1446.15S-adenosylmethionine synthetase OS=Chromohalobacte... [more]
METK_SYNP25.535e-1444.30S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_PSEMY5.535e-1443.96S-adenosylmethionine synthetase OS=Pseudomonas men... [more]
METK_COLP35.535e-1442.86S-adenosylmethionine synthetase OS=Colwellia psych... [more]
METK_THET87.229e-1447.50S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_THET27.229e-1447.50S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_THESQ7.229e-1445.05S-adenosylmethionine synthetase OS=Thermotoga sp. ... [more]
METK_THEP17.229e-1445.05S-adenosylmethionine synthetase OS=Thermotoga petr... [more]
METK_THEMA7.229e-1445.05S-adenosylmethionine synthetase OS=Thermotoga mari... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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