DN135218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135218 vs. ExPASy Swiss-Prot
Match: AMYB_THETU (Thermophilic beta-amylase OS=Thermoanaerobacter thermosulfurogenes PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.384e-24 Identity = 76/226 (33.63%), Postives = 110/226 (48.67%), Query Frame = 1 Query: 34 SIPLPPWVLEEISKNPDLVYTDKSGRRNPEYISLGCDTIPLLRGRTPIQVYSDYMRSFRDRFRDYLGDVVQEIQVGLGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMRASL------KASAEASSNEDWGRSGPHDSGQYNQFPEDTGFFQRDGTWNSEYGRFFMEWYSGKLIQHGDRILAAAKEIFQGT-GSKLSGKVAGIHWHYRSRS--HAAELTAGYYN 684 +IP+P WV + +++ ++ Y D++G + E +S P G T Q+Y+++ SF F Y D++ +I + GP GELRYP+Y S+G W +PG G QCY K S K A+ N WG S D Q + + FF + + YG F+ WY L I + A F + K+AG+HW Y S + HAAE AGYYN Sbjct: 124 NIPIPSWVWTKDTQD-NMQYKDEAGNWDNEAVS------PWYSGLT--QLYNEFYSSFASNFSSYK-DIITKIYISGGPSGELRYPSYNPSHG-WTYPGRGSLQCYSKAAITSFQNAMKSKYGTIAAVNSAWGTS-LTDFSQISPPTDGDNFFTNG--YKTTYGNDFLTWYQSVLTNELANIASVAHSCFDPVFNVPIGAKIAGVHWLYNSPTMPHAAEYCAGYYN 335
BLAST of DN135218 vs. ExPASy Swiss-Prot
Match: AMYB_PAEPO (Beta/alpha-amylase OS=Paenibacillus polymyxa PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21 Identity = 72/226 (31.86%), Postives = 111/226 (49.12%), Query Frame = 1 Query: 34 SIPLPPWVLEEISKNPDLVYTDKSGRRNPEYISLGCDTIPLLRGRTPIQVYSDYMRSFRDRFRDYLGDVVQEIQVGLGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMRASLKASAEASS------NEDWGRSGPHDSGQYNQFPEDTGFFQRDGTWNSEYGRFFMEWYSGKLIQHGDRILAAAKEIFQGT-GSKLSGKVAGIHWHYRSRS--HAAELTAGYYN 684 +IPLP W+ + S + ++ + D+SG N E +S PL G + Y + SF + F Y ++ +I + GP GELRYP+Y + G W +PG G+FQ Y + + + + + N WG S Q N P D F +G +NS YG+ F+ WY L +H I AAA + F G ++ K++G+HW + + H E GYY+ Sbjct: 127 NIPLPSWLSSKGSAD-EMQFKDESGYANSEALS------PLWSGTG--KQYDELYASFAENFAGYKS-IIPKIYLSGGPSGELRYPSYYPAAG-WSYPGRGKFQAYTETAKNAFRTAMNDKYGSLDKINAAWGTKLTSLS-QINP-PTDGDGFYTNGGYNSAYGKDFLSWYQSVLEKHLGVIGAAAHKNFDSVFGVRIGAKISGLHWQMNNPAMPHGTEQAGGYYD 339
BLAST of DN135218 vs. ExPASy Swiss-Prot
Match: AMYB_BACFI (Beta-amylase (Fragment) OS=Bacillus firmus PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21 Identity = 72/226 (31.86%), Postives = 111/226 (49.12%), Query Frame = 1 Query: 34 SIPLPPWVLEEISKNPDLVYTDKSGRRNPEYISLGCDTIPLLRGRTPIQVYSDYMRSFRDRFRDYLGDVVQEIQVGLGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMRASLKASAEASS------NEDWGRSGPHDSGQYNQFPEDTGFFQRDGTWNSEYGRFFMEWYSGKLIQHGDRILAAAKEIFQGT-GSKLSGKVAGIHWHYRSRS--HAAELTAGYYN 684 +IPLP W+ + S + ++ + D+SG N E +S PL G + Y + SF F Y ++ +I + GP GELRYP+Y + G W +PG G+FQ Y + + + + + N WG S Q N P D F +G +NS YG+ F+ WY L +H I AAA + F G ++ K++G+HW + + H+ E GYY+ Sbjct: 127 NIPLPSWLSSKGSAD-EMQFKDESGYANNEALS------PLWSGTG--KQYDELYASFAQNFAGYKS-IIPKIYLSGGPSGELRYPSYYPAAG-WSYPGRGKFQAYTETAKNAFRTAMNDKYGSLDKINTAWGTKLTSLS-QINP-PTDGDGFYTNGGYNSAYGKDFLSWYQSVLEKHLGVIGAAAHKNFDSVFGVRIGAKISGLHWQMNNPAMPHSTEQAGGYYD 339
BLAST of DN135218 vs. ExPASy Swiss-Prot
Match: AMYB_BACCI (Beta-amylase OS=Bacillus circulans PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19 Identity = 71/226 (31.42%), Postives = 109/226 (48.23%), Query Frame = 1 Query: 34 SIPLPPWVLEEISKNPDLVYTDKSGRRNPEYISLGCDTIPLLRGRTPIQVYSDYMRSFRDRFRDYLGDVVQEIQVGLGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMRASLKASAEASS------NEDWGRSGPHDSGQYNQFPEDTGFFQRDGTWNSEYGRFFMEWYSGKLIQHGDRILAAAKEIFQGT-GSKLSGKVAGIHWHYRSRS--HAAELTAGYYN 684 +IPLP W+ + S + ++ + D+SG N E +S P G + Y + SF F Y D++ +I + GP GELRYP+Y + G W +P G+FQ Y + +++ + + N WG + S P D+ F G +N YG+ F+ WY L H I AAA + F G ++ K++GIHW + S H+AE GYY+ Sbjct: 128 NIPLPSWLWSKGSAD-EMQFKDESGYVNNESLS------PFWSGVG--KQYDELYASFAQNFSAYK-DMIPKIYLSGGPSGELRYPSYYPAAG-WSYPARGKFQVYTETAKSAFRTAMTTKYGSLDKINAAWGTN--LTSMSQISPPTDSDGFYTGGGYNITYGKDFLSWYQSVLENHLGVIGAAAHKNFDPVFGVRIGAKISGIHWQMNNPSMPHSAEHAGGYYD 340
BLAST of DN135218 vs. ExPASy Swiss-Prot
Match: AMYB_BACCE (Beta-amylase OS=Bacillus cereus GN=spoII PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17 Identity = 68/225 (30.22%), Postives = 106/225 (47.11%), Query Frame = 1 Query: 34 SIPLPPWVLEEISKNPDLVYTDKSGRRNPEYIS-LGCDTIPLLRGRTPIQVYSDYMRSFRDRFRDYLGDVVQEIQVGLGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMRASL------KASAEASSNEDWGRSGPHDSGQYNQFPEDTGFFQRDGTWNSEYGRFFMEWYSGKLIQHGDRILAAAKEIFQGTGS-KLSGKVAGIHWHYRSRS--HAAELTAGY 678 ++P+P WV + S + L + ++G N E ++ L D I + Y + +F + Y DV+ +I + GP GELRYP+Y S+GT +P G+FQ Y ++ ++ K + N+ WG + P D F +G + S YG+ ++EWY G L H I A F T + K+AG+HW Y + + H AE AGY Sbjct: 130 NVPIPSWVWNQKSDD-SLYFKSETGTVNKETLNPLASDVIR--------KEYGELYTAFAAAMKPYK-DVIAKIYLSGGPAGELRYPSYTTSDGT-GYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNEVNKAWGTKLISELAILP--PSDGEQFLMNG-YLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYNNPTIPHGAEKPAGY 340 The following BLAST results are available for this feature:
BLAST of DN135218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135218 ID=DN135218; Name=DN135218; organism=Citrus sinensis; type=EST; length=684bpback to top |