DN135214

Overview
NameDN135214
Unique NameDN135214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2495 contig Csv1_Contig2495:128..648. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCBO (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis GN=echA8 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.268e-18
Identity = 51/162 (31.48%), Postives = 84/162 (51.85%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            + ++E   A + LD +P++ AI+++G+   F +G D+K ++ +T          F++ F  D       + A+   R P IA++ G  +GGG ++   CD+   +  A F   E+ L +   +G  QRL   +G   AM+L LTGR     EA+  GLVSRV
Sbjct:   31 QVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLT----------FADAFTADFFATWGKLAAV---RTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRV 179          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCLE (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae GN=echA8 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.052e-18
Identity = 53/162 (32.72%), Postives = 85/162 (52.47%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            + ++E   A   LD +P+V AI+++G+   F +G D+K ++S+T          F++ F  D       + A+   R P+IA++ G  +GGG ++   CD+   +  A F   E+ L +   +G  QRL   +G   AM+L LTGR     EA+  GLVSRV
Sbjct:   31 QMMNEITNAAKELDIDPDVGAILITGSPKVFAAGADIKEMASLT----------FTDAFDADFFSAWGKLAAV---RTPMIAAVAGYALGGGCELAMMCDLLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTIDAAEAERSGLVSRV 179          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECH12_MYCTU (Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis GN=echA12 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.052e-18
Identity = 54/155 (34.84%), Postives = 84/155 (54.19%), Query Frame = 3
Query:   30 KALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITA-DLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSR 491
            +AL+ +  + +V  +VL+G G  F  G D K+ + V  H  +  R  ++    R +  L D +  + R  +PVIA+++G  IGGG+ +  A DIR  S  A+F    ++  +TA +LG    LP  +G   A E+ LTGR     EA+ +GLVSR
Sbjct:   53 EALAQVSYDNSVRVVVLTGAGRGFSPGADHKS-AGVVPHVENLTRPTYA---LRSMELLDDVILMLRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVSAEEAERIGLVSR 203          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHM_RAT (Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.618e-18
Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 3
Query:   15 LSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVF 497
            + E  +AL + +++P V AIVL+G    F +G D+K + + T     +  G+F   +             I R +KPVIA+++G  +GGG ++   CDI +  + A F   E+ L      G  QRL   VG   AME+ LTG R    +AK+ GLVS++F
Sbjct:   66 IEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYS--GKFLSHWDH-----------ITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIF 213          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHM_BOVIN (Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.126e-17
Identity = 55/159 (34.59%), Postives = 83/159 (52.20%), Query Frame = 3
Query:   21 EFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVF 497
            E  +AL + +++P V AIVL+G    F +G D+K + S+T          F   +        D +T   R +KPVIA+++G  +GGG ++   CDI +  + A F   E+ +      G  QRL   VG   AME+ LTG R    +AK+ GLVS++F
Sbjct:   68 ELNQALQAFEEDPAVGAIVLTGGEKVFAAGADIKEMQSLT----------FQNCYSGGFLSHWDQLT---RVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIF 213          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHM_CAEEL (Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis elegans GN=ech-6 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.507e-17
Identity = 52/163 (31.90%), Postives = 85/163 (52.15%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVF 497
            + ++E   AL  LD + +V AIV++G+   F +G D+K +++  +   +T  G F   +           TA+   +KPVIA+++G  +GGG ++   CDI +  + A F   E+++      G  QR     G   AME+ LTG      EAKE G+VS++F
Sbjct:   62 QLMTELADALEVLDTDKSVGAIVITGSERAFAAGADIKEMTN--NEFATTFSGSFLSNW-----------TAVSDVKKPVIAAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHVTAQEAKEHGIVSKIF 211          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECH12_MYCLE (Probable enoyl-CoA hydratase echA12 OS=Mycobacterium leprae GN=echA12 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.277e-17
Identity = 56/176 (31.82%), Postives = 89/176 (50.57%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITA-DLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVS------RVFGTSYEL 515
            + +    + L  +  + +V  +VL+G G  FCSG D K  + V      T   R      R +  L++ + A+ R  +PVIA+I+G  IGGG+ +  A D+R  S  A+F    ++  ++A +LG    LP  VG   A E+ L+GR     EA+++GLVS      R+  T Y +
Sbjct:   48 DLMKSLKQVLKRITYDHSVRVVVLTGAGRGFCSGADQKFTAPVPQVEGLTQPVRAL----RAMELLEEVILALRRLHQPVIAAINGPAIGGGLCLALAADVRVASTRAYFRAAGINNGLSASELGLSYLLPRAVGSSRAFEIMLSGRDVGAEEAEQIGLVSYRVSDDRLLDTCYSI 219          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHESW (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain W3-18-1) GN=fadJ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.586e-17
Identity = 54/165 (32.73%), Postives = 87/165 (52.73%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            +F  E  + L+ +  +P++  +VL SG  D F +G D+  L +     T+ D    S++              +E  + PV+A+IHGAC+GGG+++  AC  R CS D      V EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV+ V
Sbjct:   32 QFGPEISEILAEIKSDPHIRGLVLISGKKDSFVAGADISMLDACK---TAGDAKALSQQGHV-------VFNELEALKIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRSKQALKMGLVNDV 186          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHM_HUMAN (Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1 SV=4)

HSP 1 Score: 86.6557 bits (213), Expect = 7.295e-17
Identity = 53/160 (33.12%), Postives = 86/160 (53.75%), Query Frame = 3
Query:   15 LSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            + E  +AL + +++P V AIVL+G    F +G D+K + +++          +S KF +      D +T +   +KPVIA+++G   GGG ++   CDI +  + A F+  E+ +      G  QRL   VG   AME+ LTG R    +AK+ GLVS++
Sbjct:   66 IDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQDC------YSSKFLKH----WDHLTQV---KKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKI 212          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHA_MOUSE (Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus GN=Hadha PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 7.295e-17
Identity = 57/166 (34.34%), Postives = 89/166 (53.61%), Query Frame = 3
Query:    6 REFLSEFPKALSSLDQNPNV-NAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            +E  SEF + ++ +  N  + +A+++S     F +G D+  LSS T   T  +  R S++ +R    L       E+  KPV+A+I G+C+GGG+++  AC  R  +KD      V EV L I    G  QRLP +VG   A ++ LTGR      AK++GLV ++
Sbjct:   66 KEVQSEFIEVMNEIWANDQIRSAVLISSKPGCFVAGADINMLSSCT---TPQEATRISQEGQRMFEKL-------EKSPKPVVAAISGSCLGGGLELAIACQYRIATKDRKTVLGVPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRNIRADRAKKMGLVDQL 221          
The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
ECHA8_MYCBO2.268e-1831.48Probable enoyl-CoA hydratase echA8 OS=Mycobacteriu... [more]
ECHA8_MYCLE5.052e-1832.72Probable enoyl-CoA hydratase echA8 OS=Mycobacteriu... [more]
ECH12_MYCTU5.052e-1834.84Probable enoyl-CoA hydratase echA12 OS=Mycobacteri... [more]
ECHM_RAT8.618e-1834.16Enoyl-CoA hydratase, mitochondrial OS=Rattus norve... [more]
ECHM_BOVIN1.126e-1734.59Enoyl-CoA hydratase, mitochondrial OS=Bos taurus G... [more]
ECHM_CAEEL2.507e-1731.90Probable enoyl-CoA hydratase, mitochondrial OS=Cae... [more]
ECH12_MYCLE4.277e-1731.82Probable enoyl-CoA hydratase echA12 OS=Mycobacteri... [more]
FADJ_SHESW5.586e-1732.73Fatty acid oxidation complex subunit alpha OS=Shew... [more]
ECHM_HUMAN7.295e-1733.13Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens... [more]
ECHA_MOUSE7.295e-1734.34Trifunctional enzyme subunit alpha, mitochondrial ... [more]

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Properties
Property NameValue
Genbank descriptionwca07h11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07h11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bp
GGGGACGTGAATTCCTCTCTGAATTCCCTAAGGCCTTATCTTCCCTCGAC
CAAAATCCTAACGTCAACGCCATCGTCCTCTCAGGCACCGGCGACCACTT
CTGCTCCGGAATCGATCTGAAAACACTAAGTTCGGTCACCGACCATACCA
CTTCCACCGACCGCGGCCGCTTCTCCGAGAAGTTCCGGCGAGATATCAGG
TTCTTGCAGGATGCGGTAACTGCCATCGAGCGATGTCGGAAGCCAGTCAT
CGCATCTATCCACGGGGCGTGTATCGGAGGCGGCGTCGATATTGTCACTG
CCTGTGATATTCGGTTCTGTTCAAAAGATGCTTTTTTTTCGGTCAAAGAG
GTTGACTTGGCTATCACGGCAGATCTCGGGACTTTACAGAGGCTTCCGGC
GATTGTCGGGTATGGTAACGCGATGGAATTGGCGTTGACGGGTCGTAGGT
TTTGGGGTTTGGAGGCTAAGGAGTTGGGTCTGGTTTCTCGGGTTTTCGGG
ACGAGTTATGAATTGGATCAG
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