DN135214

Overview
NameDN135214
Unique NameDN135214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2495 contig Csv1_Contig2495:128..648. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHEPC (Fatty acid oxidation complex subunit alpha OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.528e-17
Identity = 54/165 (32.73%), Postives = 87/165 (52.73%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            +F  E  + L+ +  +P++  +VL SG  D F +G D+  L +     T+ D    S++              +E  + PV+A+IHGAC+GGG+++  AC  R CS D      V EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV+ V
Sbjct:   32 QFGPEISEILAEIKSDPHIRGLVLISGKKDSFVAGADISMLDACK---TAGDAKALSQQGHV-------VFNELEALKIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDV 186          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHM_DICDI (Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.528e-17
Identity = 50/160 (31.25%), Postives = 81/160 (50.62%), Query Frame = 3
Query:   15 LSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            +SE   A+    ++ +V +I+++G+   F +G D+K +  VT            + +  D+      +T I   RKP+IA+++G  +GGG ++   CDI    + A F   E+ L      G  QRL   +G   AMEL LTG     +EA++ GLVS+V
Sbjct:   53 ISEINSAVKLFQEDKDVGSIIITGSEKAFAAGADIKEMEKVT----------LPDAYNNDLLAQWHDLTKI---RKPIIAAVNGYALGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNLTAVEAEKAGLVSKV 199          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ENT38 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sp. (strain 638) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.244e-16
Identity = 51/165 (30.91%), Postives = 83/165 (50.30%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDA--FFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF  +    L  +  N N+  ++ +S   D+F +G D+  ++       + +  R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ DA     + EV L +    G  QRLP +VG   A+E+ LTG++    +A ++GLV  V
Sbjct:   34 EFGVQVRSILKQVRDNKNIRGLIFISAKSDNFIAGADINMIARAKSAQEAEELARQGQQIMAEIHGLSI----------PVIAAIHGACLGGGLELALACHSRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRPRQALKVGLVDEV 188          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECO7I (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.244e-16
Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDA--FFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ DA     + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALP----------VPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLE 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHM_PONAB (Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.244e-16
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = 3
Query:   15 LSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            + E  +AL   +++P V AIVL+G    F +G D+K + +++          +S KF +      D +T I   +KPVIA+++G   GGG ++   CDI +  + A F+  E+ +      G  QRL   VG   AME+ LTG R    +AK+ GLVS++
Sbjct:   66 IDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQDC------YSSKFLKH----WDHLTQI---KKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRTVGKSLAMEMVLTGDRISAQDAKQAGLVSKI 212          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHA_RAT (Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus GN=Hadha PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.244e-16
Identity = 55/166 (33.13%), Postives = 88/166 (53.01%), Query Frame = 3
Query:    6 REFLSEFPKALSSLDQNPNV-NAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            +E  SEF + ++ +  N  + +A+++S     F +G D+  L+S T   T  +  R S++        Q     +E+  KPV+A+I G+C+GGG+++  AC  R  +KD      V EV L I    G  QRLP +VG   A ++ LTGR      AK++GLV ++
Sbjct:   66 KEVQSEFVEVMNEIWANDQIRSAVLISSKPGCFVAGADINMLASCT---TPQEAARISQEG-------QKMFEKLEKSPKPVVAAISGSCLGGGLELAIACQYRIATKDRKTVLGVPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRNIRADRAKKMGLVDQL 221          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECOSM (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.625e-16
Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDA--FFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ DA     + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALP----------VPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLE 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHD2_MOUSE (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Mus musculus GN=Echdc2 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.625e-16
Identity = 55/171 (32.16%), Postives = 83/171 (48.54%), Query Frame = 3
Query:    3 GREFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYE 512
            G  F+SE  +AL+ L ++  V  ++  S     FC+G DLK    ++D    T        F + +R L   + A      P IA++ G  +GGG+++  ACD+R  +  A   + E    +    G  QRLP  +G   A EL  TGRR  G +A+ELGLV+     + E
Sbjct:   61 GNVFVSELLEALAQLREDQQVRVLLFRSAVKGVFCAGADLKEREQMSDVEVGT--------FVQRLRGLMSEIAAFP---VPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGAQARELGLVNHAVAQNEE 220          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHESR (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-7) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16
Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF  E  + LS + ++ ++  +VL SG  D F +G D+  L +     T+ D    S++              +E    PV+A+IHGAC+GGG+++  AC  R CS D      V EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV+ V
Sbjct:   32 EFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQ---TAGDAKALSQQGHV-------VFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDV 186          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHESM (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-4) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16
Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF  E  + LS + ++ ++  +VL SG  D F +G D+  L +     T+ D    S++              +E    PV+A+IHGAC+GGG+++  AC  R CS D      V EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV+ V
Sbjct:   32 EFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQ---TAGDAKALSQQGHV-------VFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDV 186          
The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
FADJ_SHEPC9.528e-1732.73Fatty acid oxidation complex subunit alpha OS=Shew... [more]
ECHM_DICDI9.528e-1731.25Probable enoyl-CoA hydratase, mitochondrial OS=Dic... [more]
FADJ_ENT381.244e-1630.91Fatty acid oxidation complex subunit alpha OS=Ente... [more]
FADJ_ECO7I1.244e-1631.21Fatty acid oxidation complex subunit alpha OS=Esch... [more]
ECHM_PONAB1.244e-1633.75Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii... [more]
ECHA_RAT1.244e-1633.13Trifunctional enzyme subunit alpha, mitochondrial ... [more]
FADJ_ECOSM1.625e-1631.21Fatty acid oxidation complex subunit alpha OS=Esch... [more]
ECHD2_MOUSE1.625e-1632.16Enoyl-CoA hydratase domain-containing protein 2, m... [more]
FADJ_SHESR2.123e-1633.33Fatty acid oxidation complex subunit alpha OS=Shew... [more]
FADJ_SHESM2.123e-1633.33Fatty acid oxidation complex subunit alpha OS=Shew... [more]

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Properties
Property NameValue
Genbank descriptionwca07h11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07h11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bp
GGGGACGTGAATTCCTCTCTGAATTCCCTAAGGCCTTATCTTCCCTCGAC
CAAAATCCTAACGTCAACGCCATCGTCCTCTCAGGCACCGGCGACCACTT
CTGCTCCGGAATCGATCTGAAAACACTAAGTTCGGTCACCGACCATACCA
CTTCCACCGACCGCGGCCGCTTCTCCGAGAAGTTCCGGCGAGATATCAGG
TTCTTGCAGGATGCGGTAACTGCCATCGAGCGATGTCGGAAGCCAGTCAT
CGCATCTATCCACGGGGCGTGTATCGGAGGCGGCGTCGATATTGTCACTG
CCTGTGATATTCGGTTCTGTTCAAAAGATGCTTTTTTTTCGGTCAAAGAG
GTTGACTTGGCTATCACGGCAGATCTCGGGACTTTACAGAGGCTTCCGGC
GATTGTCGGGTATGGTAACGCGATGGAATTGGCGTTGACGGGTCGTAGGT
TTTGGGGTTTGGAGGCTAAGGAGTTGGGTCTGGTTTCTCGGGTTTTCGGG
ACGAGTTATGAATTGGATCAG
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