DN135214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHESA (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain ANA-3) GN=fadJ PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16 Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494 EF E + LS + ++ ++ +VL SG D F +G D+ L + T+ D S++ +E PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V Sbjct: 32 EFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQ---TAGDAKALSQQGHV-------VFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDV 186
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHEON (Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis GN=fadJ PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16 Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494 EF E + LS + ++ ++ +VL SG D F +G D+ L + T+ D S++ +E PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V Sbjct: 34 EFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQ---TAGDAKALSQQGHV-------VFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDV 188
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadJ PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16 Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLV 485 EF+ +F Q+ + ++L SG D F +G D+ S + T D +EK Q + I PV+A+IHGAC+GGG+++ AC R CS+D + EV L + G QRLP ++G +A+++ LTG++ +A LGLV Sbjct: 49 EFVDQFLNVFKQAQQSSGLKGLILISGKPDTFIAGADI---SMIAGCKTKEDARDLAEKG-------QKLFSQIANYPLPVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALDIMLTGKQLRAKQALRLGLV 200
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECOL6 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O6 GN=fadJ PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16 Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N ++ +V +S D+F +G D+ +++ + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKDLRGVVFISAKPDNFIAGADINMIANCKTAQEAEALARQGQQLMAEIHALP----------VPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLU (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.772e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALP----------VPVIAAIHGACLGGGLELALACHGRMCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLE 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SERP5 (Fatty acid oxidation complex subunit alpha OS=Serratia proteamaculans (strain 568) GN=fadJ PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16 Identity = 52/162 (32.10%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLV 485 EF+ + L Q+P + +V+ SG D F +G D+ +++ T T+ + ++K Q + I + PV+A+IHGAC+GGG+++ AC R CS D + EV L + G QRLP ++G A+++ LTG+ +A LGLV Sbjct: 38 EFVEQVNDVLIRAQQHPALEGLVIVSGKPDSFIAGADITMIAACT---TAKEAETLAKKG-------QSTLAQIAAFQVPVVAAIHGACLGGGLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGGTQRLPRLIGASKALDMILTGKHIRARQALRLGLV 189
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_PHOPR (Fatty acid oxidation complex subunit alpha OS=Photobacterium profundum GN=fadJ PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16 Identity = 53/172 (30.81%), Postives = 88/172 (51.16%), Query Frame = 3 Query: 12 FLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 F+ + L+ L ++ +V+ SG D+F +G D++ L++ T+ + + + K Q+ +E V+A+IHG C+GGG+++ AC R CS D + EV L + G QRLP ++G NA+++ LTG++ +AK LGLV S LD Sbjct: 42 FVDQVTDVLAQLKDKKDIKGMVVYSGKPDNFIAGADIRMLAACQ---TADEAQQLAAKG-------QELFGQLEALPFHVVAAIHGPCLGGGLELALACHSRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVANALDMILTGKQLRAKKAKNLGLVEEAVPLSILLD 203
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: AUHM_DICDI (Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=auh PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16 Identity = 52/162 (32.10%), Postives = 79/162 (48.77%), Query Frame = 3 Query: 3 GREFLSEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLV 485 G+ +++F L+ L P+ +++ D FCSG DLK + ++ S + + L+ + T +E + P IA+I G +GGG ++V ACD R SK + + E LAI G QRLP ++G A EL TG A E+GLV Sbjct: 72 GKNLMNQFRSHLNELRFCPDTRVVIVRSLVDGVFCSGADLKERALMSQVEAS-----------QFVHSLRSSFTELETLQMPTIAAIEGVAVGGGTEMVLACDFRVASKSSKMGLPETGLAIIPGAGGTQRLPRLIGIPRAKELIFTGAILDSKRALEIGLV 222
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHISS (Fatty acid oxidation complex subunit alpha OS=Shigella sonnei (strain Ss046) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHIFL (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri GN=fadJ PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196 The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bpback to top |