DN135214

Overview
NameDN135214
Unique NameDN135214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2495 contig Csv1_Contig2495:128..648. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHESA (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain ANA-3) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16
Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF  E  + LS + ++ ++  +VL SG  D F +G D+  L +     T+ D    S++              +E    PV+A+IHGAC+GGG+++  AC  R CS D      V EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV+ V
Sbjct:   32 EFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQ---TAGDAKALSQQGHV-------VFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDV 186          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHEON (Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16
Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF  E  + LS + ++ ++  +VL SG  D F +G D+  L +     T+ D    S++              +E    PV+A+IHGAC+GGG+++  AC  R CS D      V EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV+ V
Sbjct:   34 EFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQ---TAGDAKALSQQGHV-------VFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDV 188          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadJ PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLV 485
            EF+ +F        Q+  +  ++L SG  D F +G D+   S +    T  D    +EK        Q   + I     PV+A+IHGAC+GGG+++  AC  R CS+D      + EV L +    G  QRLP ++G  +A+++ LTG++    +A  LGLV
Sbjct:   49 EFVDQFLNVFKQAQQSSGLKGLILISGKPDTFIAGADI---SMIAGCKTKEDARDLAEKG-------QKLFSQIANYPLPVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALDIMLTGKQLRAKQALRLGLV 200          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECOL6 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O6 GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16
Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N ++  +V +S   D+F +G D+  +++      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKDLRGVVFISAKPDNFIAGADINMIANCKTAQEAEALARQGQQLMAEIHALP----------VPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLU (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.772e-16
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALP----------VPVIAAIHGACLGGGLELALACHGRMCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLE 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SERP5 (Fatty acid oxidation complex subunit alpha OS=Serratia proteamaculans (strain 568) GN=fadJ PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16
Identity = 52/162 (32.10%), Postives = 84/162 (51.85%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLV 485
            EF+ +    L    Q+P +  +V+ SG  D F +G D+  +++ T   T+ +    ++K        Q  +  I   + PV+A+IHGAC+GGG+++  AC  R CS D      + EV L +    G  QRLP ++G   A+++ LTG+     +A  LGLV
Sbjct:   38 EFVEQVNDVLIRAQQHPALEGLVIVSGKPDSFIAGADITMIAACT---TAKEAETLAKKG-------QSTLAQIAAFQVPVVAAIHGACLGGGLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGGTQRLPRLIGASKALDMILTGKHIRARQALRLGLV 189          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_PHOPR (Fatty acid oxidation complex subunit alpha OS=Photobacterium profundum GN=fadJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16
Identity = 53/172 (30.81%), Postives = 88/172 (51.16%), Query Frame = 3
Query:   12 FLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            F+ +    L+ L    ++  +V+ SG  D+F +G D++ L++     T+ +  + + K        Q+    +E     V+A+IHG C+GGG+++  AC  R CS D      + EV L +    G  QRLP ++G  NA+++ LTG++    +AK LGLV      S  LD
Sbjct:   42 FVDQVTDVLAQLKDKKDIKGMVVYSGKPDNFIAGADIRMLAACQ---TADEAQQLAAKG-------QELFGQLEALPFHVVAAIHGPCLGGGLELALACHSRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVANALDMILTGKQLRAKKAKNLGLVEEAVPLSILLD 203          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: AUHM_DICDI (Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=auh PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16
Identity = 52/162 (32.10%), Postives = 79/162 (48.77%), Query Frame = 3
Query:    3 GREFLSEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLV 485
            G+  +++F   L+ L   P+   +++    D  FCSG DLK  + ++    S           + +  L+ + T +E  + P IA+I G  +GGG ++V ACD R  SK +   + E  LAI    G  QRLP ++G   A EL  TG       A E+GLV
Sbjct:   72 GKNLMNQFRSHLNELRFCPDTRVVIVRSLVDGVFCSGADLKERALMSQVEAS-----------QFVHSLRSSFTELETLQMPTIAAIEGVAVGGGTEMVLACDFRVASKSSKMGLPETGLAIIPGAGGTQRLPRLIGIPRAKELIFTGAILDSKRALEIGLV 222          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHISS (Fatty acid oxidation complex subunit alpha OS=Shigella sonnei (strain Ss046) GN=fadJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHIFL (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri GN=fadJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196          
The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
FADJ_SHESA2.123e-1633.33Fatty acid oxidation complex subunit alpha OS=Shew... [more]
FADJ_SHEON2.123e-1633.33Fatty acid oxidation complex subunit alpha OS=Shew... [more]
FADJ_PHOLL2.123e-1632.72Fatty acid oxidation complex subunit alpha OS=Phot... [more]
FADJ_ECOL62.123e-1630.64Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_ECOLU2.772e-1630.64Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_SERP53.621e-1632.10Fatty acid oxidation complex subunit alpha OS=Serr... [more]
FADJ_PHOPR3.621e-1630.81Fatty acid oxidation complex subunit alpha OS=Phot... [more]
AUHM_DICDI3.621e-1632.10Methylglutaconyl-CoA hydratase, mitochondrial OS=D... [more]
FADJ_SHISS4.729e-1630.64Fatty acid oxidation complex subunit alpha OS=Shig... [more]
FADJ_SHIFL4.729e-1630.64Fatty acid oxidation complex subunit alpha OS=Shig... [more]

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Properties
Property NameValue
Genbank descriptionwca07h11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07h11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bp
GGGGACGTGAATTCCTCTCTGAATTCCCTAAGGCCTTATCTTCCCTCGAC
CAAAATCCTAACGTCAACGCCATCGTCCTCTCAGGCACCGGCGACCACTT
CTGCTCCGGAATCGATCTGAAAACACTAAGTTCGGTCACCGACCATACCA
CTTCCACCGACCGCGGCCGCTTCTCCGAGAAGTTCCGGCGAGATATCAGG
TTCTTGCAGGATGCGGTAACTGCCATCGAGCGATGTCGGAAGCCAGTCAT
CGCATCTATCCACGGGGCGTGTATCGGAGGCGGCGTCGATATTGTCACTG
CCTGTGATATTCGGTTCTGTTCAAAAGATGCTTTTTTTTCGGTCAAAGAG
GTTGACTTGGCTATCACGGCAGATCTCGGGACTTTACAGAGGCTTCCGGC
GATTGTCGGGTATGGTAACGCGATGGAATTGGCGTTGACGGGTCGTAGGT
TTTGGGGTTTGGAGGCTAAGGAGTTGGGTCTGGTTTCTCGGGTTTTCGGG
ACGAGTTATGAATTGGATCAG
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