DN135214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHIF8 (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri serotype 5b (strain 8401) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEINALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHIB3 (Fatty acid oxidation complex subunit alpha OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHEAM (Fatty acid oxidation complex subunit alpha OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16 Identity = 56/173 (32.37%), Postives = 83/173 (47.98%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDA--FFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 +F E L + + ++ +VL SG D F +G D+ L D +E R R +E PV+A+IHGAC+GGG+++ AC R CS + V EV L + G QRLP ++G A++L LTG++ +A ++GLV V S LD Sbjct: 32 QFAPEITAILQEIKADSSIKGLVLISGKADSFVAGADISML----------DACETAEDARLLSRQGHHVFAELEGLNIPVVAAIHGACLGGGLELALACHQRVCSDSSKTMLGVPEVQLGLLPGGGGTQRLPRLIGIAKALDLMLTGKQVRPKQAVKMGLVDDVVPESILLD 194
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLC (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECOHS (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O9:H4 (strain HS) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_YERE8 (Fatty acid oxidation complex subunit alpha OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadJ PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = 3 Query: 72 IVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFL----QDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 +++SG D F +G D+ +++ HT +D R L Q + I PV+A+IHGAC+GGG+++ AC R CS+D + EV L + G QRLP +VG A+++ LTGR+ +A ++GLV V LD Sbjct: 75 VIISGKPDSFIAGADITMIAAC--HTA------------QDARILAQKGQSILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSQDDKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSKALDMILTGRQVRARQALKMGLVDDVVPQDILLD 215
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECOSE (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain SE11) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECO8A (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8 (strain IAI1) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECO5E (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECO57 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O157:H7 GN=fadJ PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 EF S+ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ Sbjct: 34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196 The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bpback to top |