DN135214

Overview
NameDN135214
Unique NameDN135214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2495 contig Csv1_Contig2495:128..648. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECO55 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain 55989 / EAEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECO24 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHH_RHIME (Probable enoyl-CoA hydratase OS=Rhizobium meliloti GN=fadB1 PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16
Identity = 56/169 (33.14%), Postives = 82/169 (48.52%), Query Frame = 3
Query:   15 LSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQ 521
            + E   AL + D +  V AIVL+G+   F +G D+K +  +           F + +  D  FL      +   RKP+IA++ G  +GGG ++   CD    S+ A F   E+ L +   +G  QRL   VG   AM+L LTGR     EA+  GLVSRV      L++
Sbjct:   33 MRELDAALKAFDADRAVGAIVLAGSEKAFAAGADIKEMQGLD----------FVDGYLAD--FL-GGWEHVANARKPMIAAVSGFALGGGCELAMMCDFIIASETAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLILTGRMMDAAEAERSGLVSRVVAPDRLLEE 188          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHD2_BOVIN (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Bos taurus GN=ECHDC2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16
Identity = 53/171 (30.99%), Postives = 84/171 (49.12%), Query Frame = 3
Query:    3 GREFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYE 512
            G  F+S+  +AL+ L ++  V  ++  SG    FC+G DLK    +++     + G F ++ R         +T I     P IA++ G  +GGG+++  ACD+R  +  A   + E    +    G  QRLP  +G   A EL  TGRR  G +A+ LGLV+     + E
Sbjct:   61 GNVFVSQLLEALAQLREDRQVRVLIFRSGVKGVFCAGADLKEREQMSE----AEVGLFVQRLR-------GLMTEIAAFPAPTIAAMDGFALGGGLELALACDLRVAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGAQAQALGLVNHAVAQNEE 220          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHA_PIG (Trifunctional enzyme subunit alpha, mitochondrial OS=Sus scrofa GN=HADHA PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16
Identity = 53/167 (31.74%), Postives = 91/167 (54.49%), Query Frame = 3
Query:    3 GREFLSEFPKALSSLDQNPNV-NAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            G+E  SEF + ++ +  +  + +A+++S     F +G D+  LS+ T   TS +  + S++ +R    L       E+  KP++A+I+G C+GGG+++  +C  R  +KD        EV L I    G  QRLP +VG   A ++ LTGR     +AK++GLV ++
Sbjct:   65 GQELHSEFIEVMNEVWSSSQIRSAVLISSKPGCFIAGADINMLSACT---TSQEVTQISQEAQRTFEKL-------EKSTKPIVAAINGTCLGGGLELAISCQYRIATKDKKTVLGAPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRGIRADKAKKMGLVDQL 221          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECOL5 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLE 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_ECO81 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81 (strain ED1a) GN=fadJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLE 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CRT_CLOAB (3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum GN=crt PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16
Identity = 55/166 (33.13%), Postives = 84/166 (50.60%), Query Frame = 3
Query:   15 LSEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRF-----SEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            L E    +  ++ +  V A++L+G G+  F +G D+  +  +     +T  GR      ++ FRR           +E   KPVIA+++G  +GGG +I  +CDIR  S +A F   EV L IT   G  QRL  +VG G A +L  T +     EA  +GLV++V
Sbjct:   33 LKEMDYVIGEIENDSEVLAVILTGAGEKSFVAGADISEMKEM-----NTIEGRKFGILGNKVFRR-----------LELLEKPVIAAVNGFALGGGCEIAMSCDIRIASSNARFGQPEVGLGITPGFGGTQRLSRLVGMGMAKQLIFTAQNIKADEALRIGLVNKV 182          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_CITK8 (Fatty acid oxidation complex subunit alpha OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.053e-15
Identity = 49/165 (29.70%), Postives = 83/165 (50.30%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDA--FFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF ++    L  + +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I+ L            PV+A+IHGAC+GGG+++  AC  R C+ DA     + EV L +    G  QRLP +VG   A+++ LTG++    +A  +GLV  V
Sbjct:   34 EFATQVRAILKQIRENKALRGVVFISAKPDNFIAGADINMIGNCKSAQEAETLARQGQQIMAEIQALS----------VPVVAAIHGACLGGGLEMALACHRRICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRPKQALRVGLVDEV 188          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SHIDS (Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.376e-15
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF S+    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D     S+ EV L +       QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+
Sbjct:   34 EFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQDQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLSLPEVQLGLLPGSDGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLE 196          
The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
FADJ_ECO556.176e-1630.64Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_ECO246.176e-1630.64Fatty acid oxidation complex subunit alpha OS=Esch... [more]
ECHH_RHIME6.176e-1633.14Probable enoyl-CoA hydratase OS=Rhizobium meliloti... [more]
ECHD2_BOVIN6.176e-1630.99Enoyl-CoA hydratase domain-containing protein 2, m... [more]
ECHA_PIG6.176e-1631.74Trifunctional enzyme subunit alpha, mitochondrial ... [more]
FADJ_ECOL58.066e-1630.64Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_ECO818.066e-1630.64Fatty acid oxidation complex subunit alpha OS=Esch... [more]
CRT_CLOAB8.066e-1633.133-hydroxybutyryl-CoA dehydratase OS=Clostridium ac... [more]
FADJ_CITK81.053e-1529.70Fatty acid oxidation complex subunit alpha OS=Citr... [more]
FADJ_SHIDS1.376e-1530.64Fatty acid oxidation complex subunit alpha OS=Shig... [more]

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Properties
Property NameValue
Genbank descriptionwca07h11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07h11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bp
GGGGACGTGAATTCCTCTCTGAATTCCCTAAGGCCTTATCTTCCCTCGAC
CAAAATCCTAACGTCAACGCCATCGTCCTCTCAGGCACCGGCGACCACTT
CTGCTCCGGAATCGATCTGAAAACACTAAGTTCGGTCACCGACCATACCA
CTTCCACCGACCGCGGCCGCTTCTCCGAGAAGTTCCGGCGAGATATCAGG
TTCTTGCAGGATGCGGTAACTGCCATCGAGCGATGTCGGAAGCCAGTCAT
CGCATCTATCCACGGGGCGTGTATCGGAGGCGGCGTCGATATTGTCACTG
CCTGTGATATTCGGTTCTGTTCAAAAGATGCTTTTTTTTCGGTCAAAGAG
GTTGACTTGGCTATCACGGCAGATCTCGGGACTTTACAGAGGCTTCCGGC
GATTGTCGGGTATGGTAACGCGATGGAATTGGCGTTGACGGGTCGTAGGT
TTTGGGGTTTGGAGGCTAAGGAGTTGGGTCTGGTTTCTCGGGTTTTCGGG
ACGAGTTATGAATTGGATCAG
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