DN135214

Overview
NameDN135214
Unique NameDN135214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_YERPE (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis GN=fadJ PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15
Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF  +    L      P +  +V+ SG  D F +G D+  +++     T+ D    ++K        Q  +  I     PV+A+IHGAC+GGG+++  AC  R CS D      + EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV  V      LD
Sbjct:   41 EFADQIATILQQAHALPKLQGLVIVSGKPDSFIAGADITMIAACR---TAHDARVLAQKG-------QSILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSKALDMILTGKQIRPRQALKMGLVDDVVPRDILLD 203          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_YERPA (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadJ PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15
Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF  +    L      P +  +V+ SG  D F +G D+  +++     T+ D    ++K        Q  +  I     PV+A+IHGAC+GGG+++  AC  R CS D      + EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV  V      LD
Sbjct:   41 EFADQIATILQQAHALPKLQGLVIVSGKPDSFIAGADITMIAACR---TAHDARVLAQKG-------QSILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSKALDMILTGKQIRPRQALKMGLVDDVVPRDILLD 203          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_YERP3 (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15
Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            EF  +    L      P +  +V+ SG  D F +G D+  +++     T+ D    ++K        Q  +  I     PV+A+IHGAC+GGG+++  AC  R CS D      + EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV  V      LD
Sbjct:   41 EFADQIATILQQAHALPKLQGLVIVSGKPDSFIAGADITMIAACR---TAHDARVLAQKG-------QSILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSKALDMILTGKQIRPRQALKMGLVDDVVPRDILLD 203          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: AUHM_MOUSE (Methylglutaconyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Auh PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15
Identity = 57/172 (33.14%), Postives = 81/172 (47.09%), Query Frame = 3
Query:    6 REFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +  L    KA+ +L  +  V  I++ S     FC+G DLK  + +     S++ G F  K R         +  I     P IA+I G  +GGG+++  ACDIR  +  A   + E  LAI    G  QRLP  +G   A EL  + R   G EAK +GL+S V   + E D
Sbjct:   80 KNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMH----SSEVGPFVSKIR-------SVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGQEAKAVGLISHVLEQNQEGD 240          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: AUHM_HUMAN (Methylglutaconyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=AUH PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15
Identity = 56/172 (32.56%), Postives = 82/172 (47.67%), Query Frame = 3
Query:    6 REFLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +  +    KA+ +L  +  V  I++ S     FC+G DLK  + ++    S++ G F  K R         +  I     P IA+I G  +GGG+++  ACDIR  +  A   + E  LAI    G  QRLP  +G   A EL  + R   G EAK +GL+S V   + E D
Sbjct:  105 KNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMS----SSEVGPFVSKIRA-------VINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGD 265          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SALTY (Fatty acid oxidation complex subunit alpha OS=Salmonella typhimurium GN=fadJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.065e-15
Identity = 49/165 (29.70%), Postives = 82/165 (49.70%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF ++    L  + +N  +  +V +S   D+F +G D+  +    +   +    R  ++   +I+ L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP +VG   A+++ LTG++    +A + GLV  V
Sbjct:   34 EFATQVRAILKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALP----------VPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDV 188          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SALTI (Fatty acid oxidation complex subunit alpha OS=Salmonella typhi GN=fadJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.065e-15
Identity = 49/165 (29.70%), Postives = 82/165 (49.70%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF ++    L  + +N  +  +V +S   D+F +G D+  +    +   +    R  ++   +I+ L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP +VG   A+++ LTG++    +A + GLV  V
Sbjct:   34 EFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALP----------VPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDV 188          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SALPB (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fadJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.065e-15
Identity = 49/165 (29.70%), Postives = 82/165 (49.70%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF ++    L  + +N  +  +V +S   D+F +G D+  +    +   +    R  ++   +I+ L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP +VG   A+++ LTG++    +A + GLV  V
Sbjct:   34 EFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALP----------VPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDV 188          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SALNS (Fatty acid oxidation complex subunit alpha OS=Salmonella newport (strain SL254) GN=fadJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.065e-15
Identity = 49/165 (29.70%), Postives = 82/165 (49.70%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF ++    L  + +N  +  +V +S   D+F +G D+  +    +   +    R  ++   +I+ L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP +VG   A+++ LTG++    +A + GLV  V
Sbjct:   34 EFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALP----------VPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDV 188          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_SALHS (Fatty acid oxidation complex subunit alpha OS=Salmonella heidelberg (strain SL476) GN=fadJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.065e-15
Identity = 49/165 (29.70%), Postives = 82/165 (49.70%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            EF ++    L  + +N  +  +V +S   D+F +G D+  +    +   +    R  ++   +I+ L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP +VG   A+++ LTG++    +A + GLV  V
Sbjct:   34 EFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALP----------VPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDV 188          
The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
FADJ_YERPE2.347e-1531.21Fatty acid oxidation complex subunit alpha OS=Yers... [more]
FADJ_YERPA2.347e-1531.21Fatty acid oxidation complex subunit alpha OS=Yers... [more]
FADJ_YERP32.347e-1531.21Fatty acid oxidation complex subunit alpha OS=Yers... [more]
AUHM_MOUSE2.347e-1533.14Methylglutaconyl-CoA hydratase, mitochondrial OS=M... [more]
AUHM_HUMAN2.347e-1532.56Methylglutaconyl-CoA hydratase, mitochondrial OS=H... [more]
FADJ_SALTY3.065e-1529.70Fatty acid oxidation complex subunit alpha OS=Salm... [more]
FADJ_SALTI3.065e-1529.70Fatty acid oxidation complex subunit alpha OS=Salm... [more]
FADJ_SALPB3.065e-1529.70Fatty acid oxidation complex subunit alpha OS=Salm... [more]
FADJ_SALNS3.065e-1529.70Fatty acid oxidation complex subunit alpha OS=Salm... [more]
FADJ_SALHS3.065e-1529.70Fatty acid oxidation complex subunit alpha OS=Salm... [more]

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Properties
Property NameValue
Genbank descriptionwca07h11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07h11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bp
GGGGACGTGAATTCCTCTCTGAATTCCCTAAGGCCTTATCTTCCCTCGAC
CAAAATCCTAACGTCAACGCCATCGTCCTCTCAGGCACCGGCGACCACTT
CTGCTCCGGAATCGATCTGAAAACACTAAGTTCGGTCACCGACCATACCA
CTTCCACCGACCGCGGCCGCTTCTCCGAGAAGTTCCGGCGAGATATCAGG
TTCTTGCAGGATGCGGTAACTGCCATCGAGCGATGTCGGAAGCCAGTCAT
CGCATCTATCCACGGGGCGTGTATCGGAGGCGGCGTCGATATTGTCACTG
CCTGTGATATTCGGTTCTGTTCAAAAGATGCTTTTTTTTCGGTCAAAGAG
GTTGACTTGGCTATCACGGCAGATCTCGGGACTTTACAGAGGCTTCCGGC
GATTGTCGGGTATGGTAACGCGATGGAATTGGCGTTGACGGGTCGTAGGT
TTTGGGGTTTGGAGGCTAAGGAGTTGGGTCTGGTTTCTCGGGTTTTCGGG
ACGAGTTATGAATTGGATCAG
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