DN135204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARF_DROSE (Probable cytosolic Fe-S cluster assembly factor GM20417 OS=Drosophila sechellia GN=GM20417 PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 76/202 (37.62%), Postives = 109/202 (53.96%), Query Frame = 3 Query: 156 KFSPTLRIGDLSDFIAPSQNCV--VSLKKATFKNPDKPQV--------STSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNI---NKGKA---------VIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695 ++S L++ D+ DFI PSQ C+ V + KA K K ++ S S + V ISL+DCLACSGCITSAE V++ +QS +E L + +K KA ++I+L+ Q SLA + I + L + +SLG + T + D+ L+E EF+ RY R N +L MLSS+CPGW+CYAE Sbjct: 3 RWSTALQLTDIDDFITPSQICIKPVQIDKARSKTGAKIKIKGDSCFEESESGNLKLNKVDISLQDCLACSGCITSAEEVLITQQSQEELLKILQENSKNKASEDWDNVRTIVITLATQPLLSLAHRYQIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRY---------RENENLTMLSSSCPGWVCYAE 195
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARFL_DANRE (Cytosolic Fe-S cluster assembly factor narfl OS=Danio rerio GN=narfl PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 65/129 (50.39%), Postives = 86/129 (66.67%), Query Frame = 3 Query: 333 SGCITSAETVMLEKQSLDEFLSNINKGK--------AVIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695 SGCITSAE+V++ +QS +E + K V++S+SPQSRASLA H+GI +V +KLT+FLK LGV +FDT+ SR +LIE+ EF+ R+ Q E +LPML+SACPGWICYAE Sbjct: 9 SGCITSAESVLITQQSHEELYRVLRHNKQVSSTEQKVVVVSVSPQSRASLAAHYGIGSSEVARKLTSFLKHLGVHHVFDTAFSRSFSLIESQREFLQRFSQR-----EADKKALPMLASACPGWICYAE 132
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARF_DROWI (Probable cytosolic Fe-S cluster assembly factor GK14772 OS=Drosophila willistoni GN=GK14772 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27 Identity = 72/203 (35.47%), Postives = 111/203 (54.68%), Query Frame = 3 Query: 156 KFSPTLRIGDLSDFIAPSQNCV--VSLKKATFKNPDKPQVST---------SSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINKG------------KAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695 +FS L++ DL DFI PSQ C+ V++ K K K V S KQ+ + V+I+L+DCLACSGCITSAE V++ +QS +E L + + + ++ ++S Q SLA + +S + + L+ + ++LG + T + DL LIE EF+ R++ ++ L MLSS+CPGW+CYAE Sbjct: 3 RFSGALQLTDLDDFITPSQECIKPVTIDKTKSKTGAKITVQEDGYYEESEESGKQKLQKVEITLQDCLACSGCITSAEGVLITQQSQEELLKVLRENQKLKATGDNDLVQTIVFTISMQPILSLAHRYQLSVEETARHLSGYFRNLGADYVLCTKVADDLALIECRQEFVERFRDKED---------LTMLSSSCPGWVCYAE 196
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARF_DROSI (Probable cytosolic Fe-S cluster assembly factor GD17698 OS=Drosophila simulans GN=GD17698 PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.666e-27 Identity = 76/202 (37.62%), Postives = 108/202 (53.47%), Query Frame = 3 Query: 156 KFSPTLRIGDLSDFIAPSQNCV--VSLKKATFKNPDKPQV--------STSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNI---NKGKA---------VIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695 + S L++ D+ DFI PSQ C+ V + KA K K ++ S S + V ISL+DCLACSGCITSAE V++ +QS +E L + +K KA ++I+L+ Q SLA + I + L + +SLG + T + D+ L+E EF+ RY R N +L MLSS+CPGW+CYAE Sbjct: 3 RLSTALQLTDIDDFITPSQICIKPVQIDKARSKTGAKIKIKGDSCFEESESGNLKLNKVDISLQDCLACSGCITSAEEVLITQQSQEELLKVLQENSKNKASEDWDNVRTIVITLATQPILSLAHRYQIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRY---------RENENLTMLSSSCPGWVCYAE 195
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARF_DROER (Probable cytosolic Fe-S cluster assembly factor GG21400 OS=Drosophila erecta GN=GG21400 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27 Identity = 73/200 (36.50%), Postives = 107/200 (53.50%), Query Frame = 3 Query: 162 SPTLRIGDLSDFIAPSQNCV--VSLKKATFKNPDKPQV--------STSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFL----SNINKG--------KAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695 S L++ D+ DFI PSQ C+ V + KA K K + S S K++ V+I+L+DCLACSGCITSAE V++ +QS +E L N+ K + ++ +++ Q SLA + I + L + +SLG + T + D+ L+E EF+ RY R N +L MLSS+CPGW+CYAE Sbjct: 5 SRALQLTDIDDFITPSQMCIKPVKIDKAKSKTGAKIMIKDDSCFEESESGKKKLNKVEITLQDCLACSGCITSAEGVLITQQSQEELLRVLQENLTKKATEDWGNVRTIVFTIATQPLLSLAHRYQIGVEDSARHLAGYFRSLGADYVLSTKVADDIALLECRQEFVERY---------RENENLTMLSSSCPGWVCYAE 195
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARF_DROME (Probable cytosolic Fe-S cluster assembly factor CG17683 OS=Drosophila melanogaster GN=CG17683 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26 Identity = 75/202 (37.13%), Postives = 107/202 (52.97%), Query Frame = 3 Query: 156 KFSPTLRIGDLSDFIAPSQNCV--VSLKKATFKNPDKPQV--------STSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNI---NKGKA---------VIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695 + S L++ D+ DFI PSQ C+ V + KA K K ++ S S + V ISL+DCLACSGCITSAE V++ +QS +E L + +K KA ++ +L+ Q SLA + I + L + +SLG + T + D+ L+E EF+ RY R N +L MLSS+CPGW+CYAE Sbjct: 3 RLSRALQLTDIDDFITPSQICIKPVQIDKARSKTGAKIKIKGDGCFEESESGNLKLNKVDISLQDCLACSGCITSAEEVLITQQSREELLKVLQENSKNKASEDWDNVRTIVFTLATQPILSLAYRYQIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRY---------RENENLTMLSSSCPGWVCYAE 195
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARF_BRUMA (Probable cytosolic Fe-S cluster assembly factor Bm1_25010 OS=Brugia malayi GN=Bm1_25010 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.999e-26 Identity = 66/183 (36.07%), Postives = 111/183 (60.66%), Query Frame = 3 Query: 159 FSPTLRIGDLSDFIAPSQNCVVSLKKATFKNPDKPQVSTSSKQ----QAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINKGKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695 FS ++I ++SDFIAPSQ C++ L+ + +V + +K+ + V+++LKDCLACSGCITSAET+++++QS +FL + K + ++++SPQS AS+A G + + + ++G+K + D+S R LTL + +EF +ES +R P+ + CPG++CYAE Sbjct: 8 FSGIIKIANVSDFIAPSQACILPLQSKESDVEVQIRVRSRAKKVDDSAVKKVEVTLKDCLACSGCITSAETILIKEQSKPKFLEGLKKAQLSVMTVSPQSIASIAYKRGCHLSEAARLIARIFMNMGMKYVVDSSFGRLLTLSLSYDEF-------KESQLQR-----PIFTGVCPGFVCYAE 178
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_SCHPO (Cytosolic Fe-S cluster assembly factor NAR1 homolog OS=Schizosaccharomyces pombe GN=SPCC1450.10c PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.724e-24 Identity = 74/223 (33.18%), Postives = 108/223 (48.43%), Query Frame = 3 Query: 171 LRIGDLSDFIAPSQNCV--VSLKKATFKNPDKPQ--------VSTSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINKGKA---VIISLSPQSRASLAEHFGISPLQVFKKL-TTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDE----------------------------------RSNSSLPMLSSACPGWICYAE 695 L + DL+DF++P C+ +KK KN + T + ISL DCLACSGCITSAETV++ QS E L ++ K+ + +SLSPQ RA+LA ++G+S ++ L F+ LG +I DT+ SR++ L + EF + QS+ ++ N+ LP+LSS+CPGWICY E Sbjct: 4 LSVNDLNDFLSPGAVCIKPAQVKKQESKNDIRIDGDAYYEVTKDTGETSELGIASISLNDCLACSGCITSAETVLVNLQSYQEVLKHLESRKSQEILYVSLSPQVRANLAAYYGLSLQEIQAVLEMVFIGKLGFHAILDTNASREIVLQQCAQEFCNSWLQSRAHKNQNQVTNSVVNEHPLIPHSTSQISGVHSNTSSNSGINENAVLPILSSSCPGWICYVE 226
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARF_MOUSE (Nuclear prelamin A recognition factor OS=Mus musculus GN=Narf PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 61/157 (38.85%), Postives = 85/157 (54.14%), Query Frame = 3 Query: 249 NPDKPQVSTSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNIN--------KGKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695 +P K + KI L DCLAC C+T E V L +QS +FL +N K + +++S+ PQS A F +S ++L FLKSLGV +FDT+ + D +++E+ EF+ RY Q E E LPML+SACPGW+ YAE Sbjct: 35 SPAKESEEKGEFHKLADAKIFLSDCLACDSCVTVEEGVQLSQQSAKDFLHVLNLNKRCDTSKHRVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYHQHSEEQRE-----LPMLTSACPGWVRYAE 186
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARF_RAT (Nuclear prelamin A recognition factor OS=Rattus norvegicus GN=Narf PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 62/160 (38.75%), Postives = 88/160 (55.00%), Query Frame = 3 Query: 255 DKPQVSTSSKQQAE-----PVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNIN--------KGKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695 D P + ++++ E KI L DCLAC C+T E V L +QS +F +N K K +++S+ PQS A F +S ++L FLKSLGV +FDT+ + D +++E+ EF+ RY Q E E LPML+SACPGW+ YAE Sbjct: 26 DVPSPAQENEEKGEFHKLADAKIFLSDCLACDSCVTVEEGVQLSQQSAKDFFHVLNLNKRCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYHQHSEEQRE-----LPMLTSACPGWVRYAE 180 The following BLAST results are available for this feature:
BLAST of DN135204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135204 ID=DN135204; Name=DN135204; organism=Citrus sinensis; type=EST; length=696bpback to top |