DN135204

Overview
NameDN135204
Unique NameDN135204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5699 contig Csv1_Contig5699:1..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_YEAS7 (Cytosolic Fe-S cluster assembly factor NAR1 OS=Saccharomyces cerevisiae (strain YJM789) GN=NAR1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21
Identity = 67/188 (35.64%), Postives = 99/188 (52.66%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCV----VSLKKATFKNPDKPQVSTSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINK-----GKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFL-KSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P+  CV    VS  K    N +     ++   Q E V I+L DCLACSGCITS+E ++L  QS   FL N  K      K +++S+SPQ R SLA+++G++       L  F  K    K +  T   R +++ +   + IA  KQ + +  +R     P+LS+ CPG++ Y E
Sbjct:    2 SALLSESDLNDFISPALACVKPTQVSGGKKDNVNMNGEYEVSTEPDQLEKVSITLSDCLACSGCITSSEEILLSSQSHSVFLKNWGKLSQQQDKFLVVSVSPQCRLSLAQYYGLTLEAADLCLMNFFQKHFQCKYVVGTEMGRIISISKTVEKIIAHKKQKENTGADRK----PLLSAVCPGFLIYTE 185          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_CANAL (Cytosolic Fe-S cluster assembly factor NAR1 OS=Candida albicans GN=NAR1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21
Identity = 73/212 (34.43%), Postives = 99/212 (46.70%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCVVSLKKATFKNPDKPQVSTSSKQQAE----------------------------PVKISLKDCLACSGCITSAETVMLEKQSLDEFL----SNINKGKAVIISLSPQSRASLAEHFGISPLQVFKKL-TTFLKSLGVKSIFDTSCSRDLTLIEACNEFIAR-YKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C+  L  ++         + S  +  E                            P +ISL DCLACSGCITSAE V++ + S  E +    S     K  ++S+S QSRASLA  + +S   + K L   F++ +G   I  TS  R L+LI    E I R  K S     +  +SS P+LSS CPGW+ YAE
Sbjct:    2 SALLSADDLNDFISPGVACIKPLASSSTNTTTTTNTTDSYNENGEVEIQIDSQGNPLEISKIDDKQFQTNKLTPAQISLADCLACSGCITSAEEVLVAQHSHQELIKALQSQKETNKVFVVSISHQSRASLAMAYNVSIENMDKCLIDLFIRQMGFTYIVGTSLGRKLSLINEAKEIINRKTKGSGTGGIDSDSSSGPILSSICPGWVLYAE 213          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_YEAST (Cytosolic Fe-S cluster assembly factor NAR1 OS=Saccharomyces cerevisiae GN=NAR1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21
Identity = 67/188 (35.64%), Postives = 99/188 (52.66%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCV----VSLKKATFKNPDKPQVSTSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINK-----GKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFL-KSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P+  CV    VS  K    N +     ++   Q E V I+L DCLACSGCITS+E ++L  QS   FL N  K      K +++S+SPQ R SLA+++G++       L  F  K    K +  T   R +++ +   + IA  KQ + +  +R     P+LS+ CPG++ Y E
Sbjct:    2 SALLSESDLNDFISPALACVKPTQVSGGKKDNVNMNGEYEVSTEPDQLEKVSITLSDCLACSGCITSSEEILLSSQSHSVFLKNWGKLSQQQDKFLVVSVSPQCRLSLAQYYGLTLEAADLCLMNFFQKHFQCKYMVGTEMGRIISISKTVEKIIAHKKQKENTGADRK----PLLSAVCPGFLIYTE 185          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_ASHGO (Cytosolic Fe-S cluster assembly factor NAR1 OS=Ashbya gossypii GN=NAR1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.974e-21
Identity = 66/182 (36.26%), Postives = 97/182 (53.30%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCVVSLKKA-TFKNPDKPQVSTSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINK--GKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLKS-LGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI     CV   +   T    D+        Q+A  V ISL+DCLAC+GCITS+E ++L +QS   FL        KA+ +S++PQSR SLA+HFG+S  ++ + L+  L S  G K +  T   R+L++ +     + R +Q  +          P+L S CPG++ YAE
Sbjct:    2 SAKLSESDLNDFIGAQVACVKPTRTLHTADEGDEALEVGKEPQEATKVSISLQDCLACAGCITSSEEILLSRQSHGVFLEAWRSLAPKALAVSVAPQSRLSLAQHFGLSVAELDQCLSGVLGSYFGAKYVVGTQLGRELSVQQTNARLVERKQQGVQG---------PLLCSVCPGFVLYAE 174          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_PICST (Cytosolic Fe-S cluster assembly factor NAR1 OS=Pichia stipitis GN=NAR1 PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21
Identity = 71/204 (34.80%), Postives = 99/204 (48.53%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCV-------------------VSLKKATFKNPDKPQVSTSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINK------GKAVIISLSPQSRASLAEHFGISPLQVFKKL-TTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C+                   V ++  +  NP +       +    P +ISL DCLACSGCITSAE V++ + S +E +  +N+       K  + S+S QSRASLA  + +S  ++ K L   F+  +G K I  TS  R L+LI      I   K+  E D        P+LSS CPGW+ YAE
Sbjct:    2 SAILSADDLNDFISPGVACIKPPAQNSDQKFNSLNENGEVEIQIDSEGNPLEISKIDGKQTNLSPAQISLADCLACSGCITSAEEVLVAQHSHEELIKALNEKVDNNSTKVFVASISHQSRASLATAYNLSIEEIDKLLINLFINQMGFKYIVGTSIGRKLSLINEAQNLIE--KKESEFDG-------PVLSSICPGWVLYAE 196          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_COCIM (Cytosolic Fe-S cluster assembly factor NAR1 OS=Coccidioides immitis GN=NAR1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21
Identity = 75/219 (34.25%), Postives = 106/219 (48.40%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNC---VVSLKKATFKNPDKPQVSTSSKQQAE---PVKISLKDCLACSGCITSAETVMLEKQS---------------LDEFLSNINKG-----KAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLK-----------SLGVKSIFDTSCSRDLTLIEACNEFIA-RYKQSQESDDERSNSSL---PMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C   V +L   + ++    +V+T  K  AE   P +ISL DCLACSGC+TSAE V++  QS               +D F + +  G     +  + S+SPQ RAS+A  +G+S  +    +  FL              G   + DT+  RD+ L    +E  A R K    +  E +   +   P+LSSACPGWICYAE
Sbjct:    2 SAILSADDLNDFISPGVACIKPVETLPAKSERDESAYEVTTEDKVAAENPSPAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAYPELRVDGFRNGVQNGATGDARIFVASVSPQVRASMAATYGVSEKEAGYMIEQFLSGPQGLRAGGQHGSGFTWVVDTNVIRDVVLELTTDEVTASRAKFDSTATSESAEFPIPRQPILSSACPGWICYAE 220          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_CANDC (Cytosolic Fe-S cluster assembly factor NAR1 OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=NAR1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21
Identity = 74/212 (34.91%), Postives = 101/212 (47.64%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCV-----------------------VSLKKATFKNP------DKPQVSTSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEF---LSNINKGKAVIISLSPQSRASLAEHFGISPLQVFKKL--TTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C+                       V ++  +  NP      D  Q+ T+   Q  P +ISL DCLACSGCITSAE V++ + S  E    L +  K K  ++S+S QSRASLA  + ++ +++  KL    F+K +G   I  TS  R L+LI    E I            R     P+LSS CPGW+ YAE
Sbjct:    2 SALLSADDLNDFISPGVACIKPPASTNTNTNTTTTDSYNENGEVEIQIDSQGNPLEISKIDGKQIQTN---QLTPAQISLADCLACSGCITSAEEVLVAQHSHQELIKALQSPTKNKVFVVSISHQSRASLAMAYNVT-IEIMDKLLINLFIKQMGFTYIIGTSLGRKLSLINEAKEVI-----------NRKTEEGPILSSICPGWVLYAE 198          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARF_XENLA (Nuclear prelamin A recognition factor OS=Xenopus laevis GN=narf PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21
Identity = 57/148 (38.51%), Postives = 81/148 (54.73%), Query Frame = 3
Query:  276 SSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINKGKA--------VIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S   Q    KI L DCLAC  C+TS E   +  Q+  E    +N+ K         V+ S+SPQS    A  F +S  +  KKL  FLKSLGV  + DT+ + D +++E   +FI R++  +++ DE    + PM +SACPGW+ YAE
Sbjct:   36 SEFHQLAEAKIFLSDCLACGNCVTSEEGAKIFAQNQKELFKVLNRNKKCDSSLHKLVVASISPQSVPYFAVKFHLSVCEASKKLCGFLKSLGVHHVLDTTIAADFSILETQKDFIQRFR--RQTQDEH---AFPMFASACPGWVQYAE 178          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_BOTFB (Cytosolic Fe-S cluster assembly factor NAR1 OS=Botryotinia fuckeliana (strain B05.10) GN=NAR1 PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.972e-20
Identity = 68/219 (31.05%), Postives = 106/219 (48.40%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCVVSLKKATFKNP---DKPQVSTSSK----QQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINK-----------------------GKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLKS-LGVKS----------IFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C+  ++      P   ++ ++S ++         P +ISL DCLACSGC+TSAE V++  QS  E LS ++                        GK  + S+SPQSRAS+A  FG++  +    +   L    G+K+          + DT+ +R+  L+    E IA    ++E       +  P+L+S+CPGW+CYAE
Sbjct:    2 SAILSADDLNDFISPGVACIKPVETLPAAKPSADNELEISFNTDAPLPSDLPPAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLSQLDSAPGIRLHKSATGTGVSVEGLEQGGKIYVASVSPQSRASIAATFGVTEREAGYMIEHLLSGPKGIKNRAVYRNAFQWVVDTNITREACLVLGAEEVIASMNGTEE-------TKKPILTSSCPGWVCYAE 213          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_ASPFU (Cytosolic Fe-S cluster assembly factor nar1 OS=Aspergillus fumigatus GN=nar1 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20
Identity = 74/219 (33.79%), Postives = 102/219 (46.58%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNC---VVSLKKATFKNPDKPQVSTSSKQQAE---PVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINK------------------------GKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFL-----------KSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C   V SL +   ++ +  +V+   K Q E   P +ISL DCLACSGC+TSAE V++  QS  E L+ ++                         G+  + S+SPQ RASLA  +GI+  +    +  FL              G   + DT+  R+  L    +E  +    S  S    S    P+LSSACPGWICYAE
Sbjct:    2 SAILSADDLNDFISPGVACIKPVESLPQKESQSENPYEVTKEDKVQPENLPPAQISLTDCLACSGCVTSAEAVLISLQSHTEVLNTLDSYPELPLGSTSYQRGTQKVGSADSDGRIFVASVSPQVRASLAATYGITEREAKYMIDQFLMGPHGLRAGGKHGNGFTWVVDTNVMREAVLALTADEVTS----SLLSTGSGSLPKSPILSSACPGWICYAE 216          
The following BLAST results are available for this feature:
BLAST of DN135204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
NAR1_YEAS71.784e-2135.64Cytosolic Fe-S cluster assembly factor NAR1 OS=Sac... [more]
NAR1_CANAL1.784e-2134.43Cytosolic Fe-S cluster assembly factor NAR1 OS=Can... [more]
NAR1_YEAST3.043e-2135.64Cytosolic Fe-S cluster assembly factor NAR1 OS=Sac... [more]
NAR1_ASHGO3.974e-2136.26Cytosolic Fe-S cluster assembly factor NAR1 OS=Ash... [more]
NAR1_PICST5.190e-2134.80Cytosolic Fe-S cluster assembly factor NAR1 OS=Pic... [more]
NAR1_COCIM6.779e-2134.25Cytosolic Fe-S cluster assembly factor NAR1 OS=Coc... [more]
NAR1_CANDC6.779e-2134.91Cytosolic Fe-S cluster assembly factor NAR1 OS=Can... [more]
NARF_XENLA8.853e-2138.51Nuclear prelamin A recognition factor OS=Xenopus l... [more]
NAR1_BOTFB1.972e-2031.05Cytosolic Fe-S cluster assembly factor NAR1 OS=Bot... [more]
NAR1_ASPFU3.364e-2033.79Cytosolic Fe-S cluster assembly factor nar1 OS=Asp... [more]

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Properties
Property NameValue
Genbank descriptionwca07g11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07g11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135204 ID=DN135204; Name=DN135204; organism=Citrus sinensis; type=EST; length=696bp
AGGTCCTCCATTTTTNNNNTTTCTACAGAATTAATCTACCCCCTCCAAAA
AATAAAAAATAAAAAAATCCCTAAAATTGAGCTCTGAATTAATCGCCGTT
TGTTTAATCAATTCGGCGGATGCAGTGTTAAGTTGAAGAAAGAGAAATGT
CAGAGAAGTTCTCGCCTACGCTGAGAATCGGAGATCTCAGCGATTTTATA
GCACCGTCTCAGAATTGCGTTGTTTCTCTTAAAAAAGCTACCTTTAAAAA
CCCTGATAAGCCCCAGGTTTCTACTTCCAGCAAGCAGCAGGCTGAACCGG
TGAAAATCTCACTCAAGGATTGCTTAGCTTGCAGTGGATGCATTACGTCA
GCGGAGACTGTGATGCTTGAGAAGCAGAGTTTGGATGAGTTCCTATCAAA
TATTAATAAAGGAAAGGCTGTTATTATTTCCCTTTCTCCACAGTCAAGAG
CTTCCCTTGCTGAACATTTTGGCATCTCTCCTCTTCAGGTTTTCAAGAAA
CTTACAACATTCTTGAAGTCGCTTGGAGTGAAGAGCATCTTTGATACGAG
CTGCAGTAGAGACTTAACGCTTATTGAAGCTTGCAATGAGTTTATTGCTC
GCTACAAACAAAGCCAAGAATCTGATGATGAAAGGTCCAATTCATCCCTG
CCCATGCTGTCATCGGCATGTCCAGGGTGGATATGCTATGCTGAAA
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