DN135204

Overview
NameDN135204
Unique NameDN135204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_ASPFC (Cytosolic Fe-S cluster assembly factor nar1 OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=nar1 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20
Identity = 74/219 (33.79%), Postives = 102/219 (46.58%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNC---VVSLKKATFKNPDKPQVSTSSKQQAE---PVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINK------------------------GKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFL-----------KSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C   V SL +   ++ +  +V+   K Q E   P +ISL DCLACSGC+TSAE V++  QS  E L+ ++                         G+  + S+SPQ RASLA  +GI+  +    +  FL              G   + DT+  R+  L    +E  +    S  S    S    P+LSSACPGWICYAE
Sbjct:    2 SAILSADDLNDFISPGVACIKPVESLPQKESQSENPYEVTKEDKVQPENLPPAQISLTDCLACSGCVTSAEAVLISLQSHTEVLNTLDSYPELPLGSTSYQRGTQKVGSADSDGRIFVASVSPQVRASLAATYGITEREAKYMIDQFLMGPHGLRAGGKHGNGFTWVVDTNVMREAVLALTADEVTS----SLLSTGSGSLPKSPILSSACPGWICYAE 216          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_SCLS1 (Cytosolic Fe-S cluster assembly factor NAR1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=NAR1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCVVSLKKATFKNP---DKPQVSTSSK----QQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINK-----------------------GKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLKS-LGVKS----------IFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C+  ++      P   ++ ++S ++         P +ISL DCLACSGC+TSAE V++  QS  E LS ++                        GK  + S+SPQSRAS+A  FG++  +    +   L    G+K+          + DT+ +R+  L+    E IA            + S  P+L+S+CPGW+CYAE
Sbjct:    2 SAILSADDLNDFISPGVACIKPVETLPAAKPSADNELEISFNTDAPLPSDLPPAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLSQLDSAPGLRLYKNATGTGIKVEGVEQGGKIYVASVSPQSRASIAATFGVTEREAGYMIEHLLSGPKGIKNRAVYRNAFQWVVDTNITREACLVLGAEEVIASMTD--------TGSKKPVLTSSCPGWVCYAE 212          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_PENMQ (Cytosolic Fe-S cluster assembly factor nar1 OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=nar1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20
Identity = 73/221 (33.03%), Postives = 100/221 (45.25%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCVVSLK----KATFKNPDKPQVSTSSKQQAE---PVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINKGKAV-----------------------IISLSPQSRASLAEHFGISPLQVFKKLTTFLK-----------SLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSS--LPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C+  ++    K T    +  +V+T  K Q E   P +ISL DCLACSGC+TSAE V++  QS  E L+ ++  +                         + S+SPQ RASLA  + IS  +    +   L+             G   + DT+  R + L  A  E       S  S      +S   P+LSSACPGWICYAE
Sbjct:    2 SAILSADDLNDFISPGLACIKPVENFPQKNTASEENAYEVTTEDKIQPENQAPTQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAHRPAPLIITQDGNLSVSRKIEPDERIFVASVSPQVRASLAATYDISERKAGHMIDQLLRGPQGLRNGGKHGNGFTWVLDTNVLRQMVLTLAAQEVTEALHTSSASSGSGKYTSPKKPILSSACPGWICYAE 222          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_YARLI (Cytosolic Fe-S cluster assembly factor NAR1 OS=Yarrowia lipolytica GN=NAR1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 62/199 (31.16%), Postives = 98/199 (49.25%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCVVSLKKATFKNPDKPQVSTSSKQQA------------EPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINK--------GKAVIISLSPQSRASLAEHFGISPLQVFKKL-TTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C+  +K    K  +  ++   ++ QA            EP ++SL DCLACSGCITSAE+V++  QS  + L  + K         +  + S+S Q+RAS A  FG+S      KL +  L +LG   +      R+++LI +  E                ++  P+++++CPGW+CY E
Sbjct:    2 SSILSADDLNDFISPGAVCIKPIK--VDKTTENAEIEIGAQGQALEVGIDGTQKELEPAQLSLSDCLACSGCITSAESVLVALQSHTQLLDELKKEAELPSGEKRIFVCSVSHQARASFAAAFGVSVEVADAKLHSLLLDTLGFDYVVGMGVGREISLIHSAQEV-------------EKSTQKPVMAASCPGWVCYVE 185          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_NEOFI (Cytosolic Fe-S cluster assembly factor NAR1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NAR1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19
Identity = 76/219 (34.70%), Postives = 101/219 (46.12%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNC---VVSLKKATFKNPDKPQVSTSSKQQAE---PVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNI------------------NKGKA------VIISLSPQSRASLAEHFGISPLQVFKKLTTFL-----------KSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C   V SL +   ++ +  +V+   K Q E   P +ISL DCLACSGC+TSAE V++  QS  E L+ +                  N G A       + S+SPQ RASLA  +GI+  +    +  FL              G   + DT+  R+  L    +E       S  S    S    P+LSSACPGWICYAE
Sbjct:    2 SAILSADDLNDFISPGVACIKPVESLPQKESQSENPYEVTKEDKVQPENLPPAQISLTDCLACSGCVTSAEAVLISLQSHTEVLNTLDLYPELPLDFASDQRGTQNVGSADSDSRIFVASVSPQVRASLAATYGITEREAKYMIDQFLMGPHGLRAGGKHGNGFTWVVDTNVMREAVLALTADE----VTNSLLSTGSGSLPKSPILSSACPGWICYAE 216          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_ASPCL (Cytosolic Fe-S cluster assembly factor nar1 OS=Aspergillus clavatus GN=nar1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.848e-19
Identity = 73/221 (33.03%), Postives = 105/221 (47.51%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCVVSL-----KKATFKNPDKPQVSTSSKQQAE---PVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNI------------------------NKGKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLK-SLGVKS----------IFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C+  +     K++  +NP   +V+   K Q E   P +ISL DCLACSGC+TSAE V++  QS  E L+ +                        ++ +  + S+SPQ RASLA  +GIS  +    +  FL  S G+++          + DT+  R+  L    +E           D   +    P+LSSACPGWICYAE
Sbjct:    2 SAILSADDLNDFISPGVACIKPVETLPQKESQSENPY--EVTKEDKIQPENLPPAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAYPEFRLSNESGQDDIKTTETADSESRVFVASVSPQVRASLATTYGISEREAQCMIDQFLSGSQGLRAGGKFHNGFAWVVDTNTMREAVLALTADEVA---NSLTSIDPLNTLPKRPILSSACPGWICYAE 217          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_DEBHA (Cytosolic Fe-S cluster assembly factor NAR1 OS=Debaryomyces hansenii GN=NAR1 PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.411e-18
Identity = 64/202 (31.68%), Postives = 97/202 (48.02%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCVVSLKKATFK--NPDKPQVSTSSKQQAEPVKIS---------------LKDCLACSGCITSAETVMLEKQSLDEFLSNINK------GKAVIISLSPQSRASLAEHFGISPLQVFKKL-TTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C+    +   +  N +  +V      +  P++IS               L DCLACSGCITSAE +++ + S +E +  + +       K  + S+S QSRASLA  + ++  +V + L   F+  +G   I  TS  R L+LI      I++ ++  E          P LSS CPGW+ YAE
Sbjct:    2 SAILSADDLNDFISPGVACIKPPAENVNRDTNNENGEVDIQIDNEGNPIEISRLDGTATSLSAAQISLADCLACSGCITSAEEILVAQHSHNELIKALKEKVQNKTDKVFVASISHQSRASLATAYNLTVEEVDRLLINLFINQMGFSYIVGTSLGRKLSLIYESQNIISKKEEKFEG---------PTLSSICPGWVLYAE 194          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_NEUCR (Cytosolic Fe-S cluster assembly factor nar-1 OS=Neurospora crassa GN=nar-1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18
Identity = 66/228 (28.95%), Postives = 106/228 (46.49%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCVVSLKKATFKNPDKPQVSTS-------------SKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINKGKAV------------------------IISLSPQSRASLAEHF--GISPLQVFKKL-TTFLKSLGVKS----------IFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L + DL+DFI+P   C+  ++      P     ++S             +K  A P +ISL DCLACSGC+TSAE V++  QS +E L+ ++   A+                        + S+SPQSRASLA     G++  Q  + +   FL   G+            + DT+ +R+ TL+   +E +       +       ++ P+L+++CPGW+CYAE
Sbjct:    2 SAILSVDDLNDFISPGVACIKPIETLPTAAPPAGDANSSLEVEVILDGQQPEAKSNAPPAEISLTDCLACSGCVTSAEAVLVSLQSHNEVLNMLDSAPALKLVGPDANGKHSVQGLENSDAKLYVASVSPQSRASLAAACGNGVTEQQAGRMIEQLFLGEQGLARGGKWGNKFTWVVDTNTAREATLVLGSDEVLGGLIAPSD------KAATPVLTASCPGWVCYAE 223          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NAR1_LODEL (Cytosolic Fe-S cluster assembly factor NAR1 OS=Lodderomyces elongisporus GN=NAR1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18
Identity = 68/219 (31.05%), Postives = 100/219 (45.66%), Query Frame = 3
Query:  162 SPTLRIGDLSDFIAPSQNCVVSLKKATFK-NPDKPQVSTSSKQQAE--------------------------------PVKISLKDCLACSGCITSAETVMLEKQSLDEFLSNINKG-------KAVIISLSPQSRASLAEHFGISPLQVFKKL-TTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            S  L   DL+DFI+P   C+  + +   + NP     S++  +  E                                P +ISL DCLACSGCITSAE V++ + S  E L  + +        K  + S+S Q RASLA  + +S  ++ K L   F+  +G + +  TS  R L+LI      I R ++ +   +   N   P+LSS CPGW+ YAE
Sbjct:    2 SAILSADDLNDFISPGVACIKPVTQPKSELNPQHVDSSSTISETGEVEIQIDSQGNPLEISQIDTKINKADPSSTALTPAQISLADCLACSGCITSAEEVLVAQHSHHELLKAMEESSLASGTEKVFVASISQQLRASLAMAYDMSIEEMDKLLINLFVNQMGFQYVVGTSLGRKLSLINESQGMIHRKEEGKTIGENLKN---PVLSSICPGWVLYAE 217          
BLAST of DN135204 vs. ExPASy Swiss-Prot
Match: NARF_DANRE (Nuclear prelamin A recognition factor OS=Danio rerio GN=narf PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18
Identity = 49/155 (31.61%), Postives = 83/155 (53.55%), Query Frame = 3
Query:  255 DKPQVSTSSKQQAEPVKISLKDCLACSGCITSAETVMLEKQSLDEF--------LSNINKGKAVIISLSPQSRASLAEHFGISPLQVFKKLTTFLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACPGWICYAE 695
            +K   S   ++     ++ L  CL+C GCI+  E   + +Q+LDE           + +K K +++S+ PQS    A  F +      +KL  FLKS+GV  +FDT+ +   +++E+  EF+ RY++          +++PM +S+CPGWI YAE
Sbjct:   34 EKGVASGEVRESTSVQQVLLSACLSCDGCISEDEGKRISQQNLDEINHVLALNKKCDTSKHKILVVSVCPQSVPFFAVKFQLDVSAAAQKLCGFLKSVGVHYVFDTTIAASFSILESQREFVQRYRRK-----HHDANAMPMFTSSCPGWIRYAE 183          
The following BLAST results are available for this feature:
BLAST of DN135204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
NAR1_ASPFC3.364e-2033.79Cytosolic Fe-S cluster assembly factor nar1 OS=Asp... [more]
NAR1_SCLS15.738e-2031.05Cytosolic Fe-S cluster assembly factor NAR1 OS=Scl... [more]
NAR1_PENMQ7.495e-2033.03Cytosolic Fe-S cluster assembly factor nar1 OS=Pen... [more]
NAR1_YARLI1.278e-1931.16Cytosolic Fe-S cluster assembly factor NAR1 OS=Yar... [more]
NAR1_NEOFI1.670e-1934.70Cytosolic Fe-S cluster assembly factor NAR1 OS=Neo... [more]
NAR1_ASPCL2.848e-1933.03Cytosolic Fe-S cluster assembly factor nar1 OS=Asp... [more]
NAR1_DEBHA2.411e-1831.68Cytosolic Fe-S cluster assembly factor NAR1 OS=Deb... [more]
NAR1_NEUCR5.371e-1828.95Cytosolic Fe-S cluster assembly factor nar-1 OS=Ne... [more]
NAR1_LODEL5.371e-1831.05Cytosolic Fe-S cluster assembly factor NAR1 OS=Lod... [more]
NARF_DANRE9.162e-1831.61Nuclear prelamin A recognition factor OS=Danio rer... [more]

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Properties
Property NameValue
Genbank descriptionwca07g11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07g11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135204 ID=DN135204; Name=DN135204; organism=Citrus sinensis; type=EST; length=696bp
AGGTCCTCCATTTTTNNNNTTTCTACAGAATTAATCTACCCCCTCCAAAA
AATAAAAAATAAAAAAATCCCTAAAATTGAGCTCTGAATTAATCGCCGTT
TGTTTAATCAATTCGGCGGATGCAGTGTTAAGTTGAAGAAAGAGAAATGT
CAGAGAAGTTCTCGCCTACGCTGAGAATCGGAGATCTCAGCGATTTTATA
GCACCGTCTCAGAATTGCGTTGTTTCTCTTAAAAAAGCTACCTTTAAAAA
CCCTGATAAGCCCCAGGTTTCTACTTCCAGCAAGCAGCAGGCTGAACCGG
TGAAAATCTCACTCAAGGATTGCTTAGCTTGCAGTGGATGCATTACGTCA
GCGGAGACTGTGATGCTTGAGAAGCAGAGTTTGGATGAGTTCCTATCAAA
TATTAATAAAGGAAAGGCTGTTATTATTTCCCTTTCTCCACAGTCAAGAG
CTTCCCTTGCTGAACATTTTGGCATCTCTCCTCTTCAGGTTTTCAAGAAA
CTTACAACATTCTTGAAGTCGCTTGGAGTGAAGAGCATCTTTGATACGAG
CTGCAGTAGAGACTTAACGCTTATTGAAGCTTGCAATGAGTTTATTGCTC
GCTACAAACAAAGCCAAGAATCTGATGATGAAAGGTCCAATTCATCCCTG
CCCATGCTGTCATCGGCATGTCCAGGGTGGATATGCTATGCTGAAA
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