DN135200

Overview
NameDN135200
Unique NameDN135200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.336e-36
Identity = 75/123 (60.98%), Postives = 92/123 (74.80%), Query Frame = 2
Query:  143 LQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPE 511
            L+  ++ + AVNDPFI  DYM YMFKYDSVHG+++  E+  KD K ++ G K +TVF  R+P  IPW   GA+YVVESTGVFT  +KA+ HLKGGAKKVIISAPS DAPMFV GVN + Y P+
Sbjct:    1 LENPEINITAVNDPFIDLDYMVYMFKYDSVHGRFEG-EVSTKDGKLVING-KAITVFAERDPANIPWGTVGAQYVVESTGVFTTIEKASAHLKGGAKKVIISAPSSDAPMFVCGVNLDAYDPK 121          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.051e-36
Identity = 73/142 (51.41%), Postives = 96/142 (67.61%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPE 511
            VK+ ING G+IGRLV R+ L R +V +VA+NDPFIT DY  YMFKYDS HG++        +  TL+   K + VF  R+P ++PW E G +  ++STGVF + D A  H+  GAKKV+I+APS  APMFV+GVNE +Y  E
Sbjct:    2 VKVAINGLGKIGRLVMRIALSRANVEVVAINDPFITVDYAAYMFKYDSTHGKYAGDVQY--EGNTLVIDGKKIKVFQERDPAQLPWGEEGIDIAIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYAGE 141          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.985e-36
Identity = 76/134 (56.72%), Postives = 96/134 (71.64%), Query Frame = 2
Query:  113 RIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            RIGRLV R       V +VA+NDPFI  +YM YMF+YDS HG++K   +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT  +KA  HLKGGAK+VIISAPS DAPMFV+GVN ++Y   L
Sbjct:    1 RIGRLVTRAAFTSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFKG-TVKAENGKLVING-KAITIFQERDPTNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHDKYDNSL 132          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P3_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Saccharomyces cerevisiae GN=TDH3 PE=1 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 3.985e-36
Identity = 71/143 (49.65%), Postives = 96/143 (67.13%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            V++ INGFGRIGRLV R+ L R +V +VA+NDPFIT DY  YMFKYDS HG++        DDK ++   K +  +  R+P  +PW  +  +  ++STGVF + D A  H+  GAKKV+I+APS  APMFV+GVNE +Y  +L
Sbjct:    2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSH--DDKHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDL 142          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 3.985e-36
Identity = 73/139 (52.52%), Postives = 95/139 (68.35%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            V+I INGFGRIGRLV R+ L R ++ +VA+NDPFIT DY  YMFKYDS HG++        D K+L+   K V VF  R+P  +PW     +  ++STG+F + D A  H+  GAKKV+I+APS  APMFVVGVNE++Y
Sbjct:    2 VRIAINGFGRIGRLVLRIALSRKNIEVVAINDPFITVDYAAYMFKYDSTHGRFDGEVSH--DGKSLIIDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKY 138          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_SHEEP (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4)

HSP 1 Score: 150.214 bits (378), Expect = 5.205e-36
Identity = 76/133 (57.14%), Postives = 93/133 (69.92%), Query Frame = 2
Query:  116 IGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            IGRLV R       V +VA+NDPFI   YM YMF+YDS HG++ H  +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT  +KA  HLKGGAKKVIISAPS DAPMFV+GVN  +Y   L
Sbjct:    1 IGRLVTRAAFNTGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKKVIISAPSADAPMFVMGVNHEKYNNTL 131          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.205e-36
Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            V+I INGFGRIGRLV R+ L R ++ +VA+NDPFIT DY  YMFKYDS HG++        D K L+   K V VF  R+P  +PW     +  ++STG+F + D A  H+  GAKKV+I+APS  APMFVVGVNE++Y
Sbjct:    2 VRIAINGFGRIGRLVLRIALSRKNIEVVAINDPFITVDYAAYMFKYDSTHGRFDGEVSH--DGKALIIDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKY 138          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P2_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=TDH2 PE=1 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 5.205e-36
Identity = 72/143 (50.35%), Postives = 96/143 (67.13%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            V++ INGFGRIGRLV R+ LQR +V +VA+NDPFI+ DY  YMFKYDS HG++        DDK ++     +  F  R+P  +PWA    +  ++STGVF + D A  H+  GAKKV+I+APS  APMFV+GVNE +Y  +L
Sbjct:    2 VRVAINGFGRIGRLVMRIALQRKNVEVVALNDPFISNDYSAYMFKYDSTHGRYAGEVSH--DDKHIIVDGHKIATFQERDPANLPWASLNIDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDL 142          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_PHYIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Phytophthora infestans GN=GPDA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36
Identity = 73/144 (50.69%), Postives = 98/144 (68.06%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            + + INGFGRIGRLV R   +   + +VA+NDPF++T YM YM +YD+VHG++   +  +  D+T +F   KP+ VF   NPE I W E   +YVVESTG FT  +KA+ HLK G +KV+ISAPS DAPMFV+GVN   Y+  +
Sbjct:    1 MNVAINGFGRIGRLVLRASAKNPLINIVAINDPFVSTTYMEYMLEYDTVHGKF---DGSLSHDETHIFVNGKPIRVFNEMNPENIKWGEEQVQYVVESTGAFTTLEKASTHLKNGVEKVVISAPSSDAPMFVMGVNHELYEKNM 141          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36
Identity = 78/146 (53.42%), Postives = 99/146 (67.81%), Query Frame = 2
Query:   77 MGKVKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            M  +  GINGF           L+   V +VA+NDPFI  +YM YMFKYDS HG++K   ++ KD K ++ G + + V   R+P +IPW   GA+YV+ESTGVFT KD A+ HLKGGAKKVIISAPS DAPMFVVGVN ++Y  +L
Sbjct:    1 MSTINTGINGFRSHWPYCLACSLENPKVKVVAINDPFIDLEYMVYMFKYDSTHGRFKG-TVEHKDGKLVVNGHE-IAVHAERDPAQIPWGSHGADYVIESTGVFTTKDAASAHLKGGAKKVIISAPSADAPMFVVGVNLDKYTSDL 144          
The following BLAST results are available for this feature:
BLAST of DN135200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
G3P_BOLED2.336e-3660.98Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_ASHGO3.051e-3651.41Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3P_MESAU3.985e-3656.72Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P3_YEAST3.985e-3649.65Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Sacc... [more]
G3P2_KLUMA3.985e-3652.52Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_SHEEP5.205e-3657.14Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P3_KLUMA5.205e-3652.52Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P2_YEAST5.205e-3650.35Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Sacc... [more]
G3P_PHYIN6.798e-3650.69Glyceraldehyde-3-phosphate dehydrogenase OS=Phytop... [more]
G3P3_RHIRA6.798e-3653.42Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhiz... [more]

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Properties
Property NameValue
Genbank descriptionwca07g07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07g07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135200 ID=DN135200; Name=DN135200; organism=Citrus sinensis; type=EST; length=514bp
GGGGACGACTGCTCTCCCTACTCTCTACAACTTTCTTCACCACTCATTCA
CCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGAATC
AACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCAGAG
GGACGATGTTGGACTCGTTGCTGTTAATGATCCCTTTATCACAACCGATT
ACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAGCAC
CATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAAGCC
TGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTGAGA
CTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAGGAT
AAGGCTGCTGTCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTCAGC
CCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACGAGT
ACAAACCAGAGCTC
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