DN135200

Overview
NameDN135200
Unique NameDN135200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_PICAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia angusta GN=GPD PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.414e-41
Identity = 80/141 (56.74%), Postives = 101/141 (71.63%), Query Frame = 2
Query:   92 IGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            +GINGFGRIGRLV R+ L RDD+ ++A+NDPFI  DY  YMFKYDS HG++K       + K L+   K + VF  R+P  IPW + G +YV++STGVFT  + A  H+  GAKKVII+APSKDAPMFVVGVN  EY P++
Sbjct:    5 VGINGFGRIGRLVLRIALSRDDINVIAINDPFIAPDYAAYMFKYDSTHGKFKG--TVTHEGKYLVINGKKIEVFQERDPANIPWGKEGVDYVLDSTGVFTTIEGAQKHIDAGAKKVIITAPSKDAPMFVVGVNHEEYTPDI 143          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.414e-41
Identity = 86/139 (61.87%), Postives = 102/139 (73.38%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            VK GINGFGRIGR+V R  L   D+ +VAVNDPFI  +YM YMFKYDSVHG++K   ++ KD K  + G KP+ VF  ++P  IPW   GAEY+VESTGVFT  +KA+ HLKG  KKVIISAPS DAPMFV GVN + Y
Sbjct:    3 VKAGINGFGRIGRIVLRNALLHGDIDVVAVNDPFIDLEYMVYMFKYDSVHGRFKG-SVEAKDGKLYVEG-KPIHVFAEKDPANIPWGSVGAEYIVESTGVFTTTEKASAHLKGVCKKVIISAPSADAPMFVCGVNLDAY 139          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.414e-41
Identity = 87/142 (61.27%), Postives = 105/142 (73.94%), Query Frame = 2
Query:   89 KIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            KIGINGFGRIGRLV R  L+     +VAVNDPFI  +YM YMFKYDS HG +K  E+K +D   ++ G+K +TVF    PE IPW++ GAEY+VESTGVFT  +KA+ H KGGAKKVIISAPS DAPMFV GVN  +Y  ++
Sbjct:    2 KIGINGFGRIGRLVLRAALEMG-AQVVAVNDPFIALEYMVYMFKYDSTHGMFKG-EVKAEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDM 140          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 168.703 bits (426), Expect = 1.414e-41
Identity = 81/142 (57.04%), Postives = 106/142 (74.65%), Query Frame = 2
Query:   89 KIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            K+GINGFGRIGR+V R  ++ + V +VAVNDPFI   Y  YM KYDS HG++  +     D  TL+   K +  +  R+P +IPW+ETGAEYVVESTGVFT ++KA++HLKGGAKKVIISAPS D+PMFV+GVN ++Y  ++
Sbjct:    5 KVGINGFGRIGRIVFRNAIEHEGVDIVAVNDPFIEVHYAAYMLKYDSTHGRF--NGTVEFDGNTLIVNGKKIKFYAERDPAQIPWSETGAEYVVESTGVFTKQEKASLHLKGGAKKVIISAPSSDSPMFVMGVNNDQYTKDI 144          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.414e-41
Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPE 511
            V +GINGFGRIGR+V R  L    + +VA+NDPFI  +YM YMFKYDSVHG++K   ++ KD K  + G KPV V+G +NP +I W   G +YVVESTGVFT  +KA  HLKGGAKKVIISAPS DAPMFV+G N ++Y P+
Sbjct:    2 VNVGINGFGRIGRIVFRNALLNPKIQVVAINDPFINLEYMVYMFKYDSVHGRFKG-TVEAKDGKLWIQG-KPVIVYGEKNPSDIKWGAAGRDYVVESTGVFTTVEKAEGHLKGGAKKVIISAPSADAPMFVMGCNLDQYDPK 141          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.847e-41
Identity = 85/139 (61.15%), Postives = 106/139 (76.26%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            VK+GINGFGRIGR+V R  L   +V +VAVNDPFI  +YM YMFKYDSVHG++K   ++ K  K ++ G K ++VFG ++   IPW+  GAEY+VESTGVFT  +KA+ HLKGGAKKVIISAPS DAPM+V GVN + Y
Sbjct:    3 VKVGINGFGRIGRIVLRNALLNPEVNVVAVNDPFIALEYMVYMFKYDSVHGRFKG-TVETKGGKLIVDG-KEISVFGEKDAGAIPWSSVGAEYIVESTGVFTTIEKASAHLKGGAKKVIISAPSADAPMYVCGVNLDSY 139          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 1.847e-41
Identity = 84/143 (58.74%), Postives = 104/143 (72.73%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            VK+G+NGFGRIGRLV R  +    V +VA+NDPFI  +YM YMFKYDS HG +K   +K ++ K ++ G   +T+F  R+P  I WA+ GAEYVVESTGVFT  +KA  HLKGGAK+VIISAPS DAPMFV+GVN  +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKG-TVKAENGKLVINGHA-ITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDKSL 142          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_RABIT (Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus GN=GAPDH PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 2.412e-41
Identity = 83/143 (58.04%), Postives = 103/143 (72.03%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            VK+G+NGFGRIGRLV R       V +VA+NDPFI   YM YMF+YDS HG++ H  +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT  +KA  HLKGGAK+VIISAPS DAPMFV+GVN  +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.412e-41
Identity = 86/143 (60.14%), Postives = 103/143 (72.03%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            VK+GINGFGRIGR+V R  ++ +DV +VAVNDPFI   Y  YM KYDS HGQ+K  ++KV D   L    K V     ++P  IPW+ETGA YVVESTGVFT  +KA  HLKGGAKKV+ISAPS DAPMFV+GVN   YK ++
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSTHGQFKG-DIKV-DGNNLTVNGKTVRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMFVMGVNHETYKSDI 143          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 2.412e-41
Identity = 83/143 (58.04%), Postives = 106/143 (74.13%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            VK+G+NGFGRIGRLV R       V +VA+NDPFI  +YM YMF+YDS HG++K   +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT  +KA  HLKGGAK+VIISAPS DAPMFV+GVN+++Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFTSGKVEVVAINDPFIDLNYMVYMFQYDSTHGKFKG-TVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNQDKYDNSL 142          
The following BLAST results are available for this feature:
BLAST of DN135200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
G3P_PICAN1.414e-4156.74Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_PHACH1.414e-4161.87Glyceraldehyde-3-phosphate dehydrogenase OS=Phaner... [more]
G3P_PANVR1.414e-4161.27Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_MONAN1.414e-4157.04Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P_LYOSH1.414e-4159.86Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophy... [more]
G3P_LENED1.847e-4161.15Glyceraldehyde-3-phosphate dehydrogenase OS=Lentin... [more]
G3P_CHICK1.847e-4158.74Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus... [more]
G3P_RABIT2.412e-4158.04Glyceraldehyde-3-phosphate dehydrogenase OS=Orycto... [more]
G3P_CURLU2.412e-4160.14Glyceraldehyde-3-phosphate dehydrogenase OS=Curvul... [more]
G3P_CRIGR2.412e-4158.04Glyceraldehyde-3-phosphate dehydrogenase OS=Cricet... [more]

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Properties
Property NameValue
Genbank descriptionwca07g07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07g07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135200 ID=DN135200; Name=DN135200; organism=Citrus sinensis; type=EST; length=514bp
GGGGACGACTGCTCTCCCTACTCTCTACAACTTTCTTCACCACTCATTCA
CCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGAATC
AACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCAGAG
GGACGATGTTGGACTCGTTGCTGTTAATGATCCCTTTATCACAACCGATT
ACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAGCAC
CATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAAGCC
TGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTGAGA
CTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAGGAT
AAGGCTGCTGTCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTCAGC
CCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACGAGT
ACAAACCAGAGCTC
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