DN135200

Overview
NameDN135200
Unique NameDN135200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1066 contig Csv1_Contig1066:307..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P2_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis briggsae GN=gpd-2 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.197e-40
Identity = 84/146 (57.53%), Postives = 105/146 (71.92%), Query Frame = 2
Query:   77 MGKVKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE----KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            M K  +GINGFGRIGRLV R  +++D V +VAVNDPFI+ DYM Y+F+YDS HG++K   +K + D  ++  E      + V+  ++P EI W   GA+YVVESTGVFT  +KA  HLKGGAKKVIISAPS DAPMFVVGVN  +Y
Sbjct:    1 MSKPTVGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKG-TVKHEGDYLIVANEGKSQHKIKVYNSKDPAEIQWGAAGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.564e-40
Identity = 81/144 (56.25%), Postives = 108/144 (75.00%), Query Frame = 2
Query:   77 MGKVKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKP 508
            M  + +GINGFGRIGRLV R  LQ+  + +VA+NDPFI   YM YMFKYDS HG++K  E+ ++D K L+  +  ++VF    P EIPW + GA+YVVESTGVF   DKA+ H++GGAK+V++SAPS DAPMFV+GVNE+++ P
Sbjct:    1 MSDLCVGINGFGRIGRLVLRACLQKG-IKVVAINDPFIDLQYMVYMFKYDSTHGRYKG-EVSMEDGK-LIVDDHSISVFQCMKPHEIPWGKAGADYVVESTGVFLSIDKASSHIQGGAKRVVVSAPSPDAPMFVMGVNEDKFDP 141          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.564e-40
Identity = 84/142 (59.15%), Postives = 99/142 (69.72%), Query Frame = 2
Query:   77 MGKVKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            M  +K+GINGFGRIGR+V R  ++  DV +VAVNDPFI T Y  YM KYDS HG +       +D   L+   K V  +  R+P  IPW ETGA+YVVESTGVFT  DKA  HL+GGAKKVIISAPS DAPM+V+GVNE  Y
Sbjct:    1 MAPIKVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIETKYAAYMLKYDSTHGIFNGEI--AQDGNDLVINGKKVKFYTERDPAVIPWKETGADYVVESTGVFTTIDKAKAHLQGGAKKVIISAPSADAPMYVMGVNEKSY 140          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_USTMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ustilago maydis GN=GAPD PE=3 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 2.042e-40
Identity = 81/145 (55.86%), Postives = 104/145 (71.72%), Query Frame = 2
Query:   77 MGKVKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPE 511
            M +V IGINGFGRIGR+V R  +  +   +VA+NDPFI  +YM YM KYDS HG + + ++  KD K ++ G K + VF  ++P  IPW + GA YVVESTGVFT  DKA+ H+KGGAKKV+ISAPS DAPM+V GVN + Y P+
Sbjct:    1 MSQVNIGINGFGRIGRIVFRNSVVHNTANVVAINDPFIDLEYMVYMLKYDSTHGVF-NGDISTKDGKLIVNG-KSIAVFAEKDPSNIPWGQAGAHYVVESTGVFTTIDKASAHIKGGAKKVVISAPSADAPMYVCGVNLDAYDPK 143          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P4_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caenorhabditis elegans GN=gpd-4 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.042e-40
Identity = 85/148 (57.43%), Postives = 103/148 (69.59%), Query Frame = 2
Query:   77 MGKVKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP------VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            M K  +GINGFGRIGRLV R  +++D V +VAVNDPFIT DYM Y+FKYDS HGQ+K     V  D   L  +K       + VF  ++P  I W    A++VVESTGVFT K+KA+ HL+GGAKKVIISAPS DAPM+VVGVN  +Y
Sbjct:    1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKG---TVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKY 145          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P1_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caenorhabditis elegans GN=gpd-1 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.042e-40
Identity = 85/148 (57.43%), Postives = 103/148 (69.59%), Query Frame = 2
Query:   77 MGKVKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP------VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            M K  +GINGFGRIGRLV R  +++D V +VAVNDPFIT DYM Y+FKYDS HGQ+K     V  D   L  +K       + VF  ++P  I W    A++VVESTGVFT K+KA+ HL+GGAKKVIISAPS DAPM+VVGVN  +Y
Sbjct:    1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKG---TVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKY 145          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P2_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhizomucor racemosus GN=GPD2 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.667e-40
Identity = 83/142 (58.45%), Postives = 105/142 (73.94%), Query Frame = 2
Query:   89 KIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            ++GINGFGRIGR+V R  L   +V +VA+NDPFI  +YM YMFKYDSVHG+++   ++ KD K ++ G K ++VF  R+P +IPW    A YVVESTGVFT  D A+ HL+GGAKKVIISAPS DAPMFV GVN  +Y  +L
Sbjct:    4 QVGINGFGRIGRIVLRASLSNPEVQVVAINDPFIPLEYMVYMFKYDSVHGRFQG-TVEAKDGKLVVNG-KEISVFSERDPAQIPWGSVEAAYVVESTGVFTSIDAASAHLQGGAKKVIISAPSGDAPMFVCGVNLEKYTSDL 143          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_SORMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Sordaria macrospora GN=GPD PE=3 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 3.483e-40
Identity = 81/139 (58.27%), Postives = 103/139 (74.10%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            VK+GINGFGRIGR+V R  ++ DD+ +VAVNDPFI   Y  YM +YDS HG +K   + V+    ++ G+K V  +  R+P  IPW+ETGA+Y+VESTGVFT  +KA+ HLKGGAKKVIISAPS DAPM+V+GVN   Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHDDIQIVAVNDPFIEPKYAEYMLRYDSTHGNFKG-TIAVEGSDLVVNGKK-VKFYTERDPSAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNESY 139          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P2_DROME (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila melanogaster GN=Gapdh2 PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 3.483e-40
Identity = 84/142 (59.15%), Postives = 102/142 (71.83%), Query Frame = 2
Query:   89 KIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            KIGINGFGRIGRLV R  + +    +VAVNDPFI  +YM Y+FK+DS HG++K       +   L+   + +TVF  R+P  I WA  GAEY+VESTGVFT  DKA+ HLKGGAKKVIISAPS DAPMFV GVN + YKP++
Sbjct:    3 KIGINGFGRIGRLVLRAAIDKG-ANVVAVNDPFIDVNYMVYLFKFDSTHGRFKG--TVAAEGGFLVVNGQKITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVNLDAYKPDM 141          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.483e-40
Identity = 79/140 (56.43%), Postives = 106/140 (75.71%), Query Frame = 2
Query:   89 KIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKP 508
            K+GINGFGRIGR+V R  L    + +VA+NDPFI  +YM YMFKYDS HG++    +++KD K ++ G   + V   R+P +I W+ +GA+YV+ESTGVFT ++ A+ HLKGGAK+VIISAPSKDAPM+VVGVNE ++ P
Sbjct:    5 KVGINGFGRIGRIVLRNALVAKTIQVVAINDPFIDLEYMAYMFKYDSTHGRFDG-SVEIKDGKLVIDGNA-IDVHNERDPADIKWSTSGADYVIESTGVFTTQETASAHLKGGAKRVIISAPSKDAPMYVVGVNEEKFNP 142          
The following BLAST results are available for this feature:
BLAST of DN135200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
G3P2_CAEBR1.197e-4057.53Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]
G3P_ONCMY1.564e-4056.25Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorh... [more]
G3P_COLLN1.564e-4059.15Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_USTMA2.042e-4055.86Glyceraldehyde-3-phosphate dehydrogenase OS=Ustila... [more]
G3P4_CAEEL2.042e-4057.43Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caen... [more]
G3P1_CAEEL2.042e-4057.43Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caen... [more]
G3P2_RHIRA2.667e-4058.45Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhiz... [more]
G3P_SORMA3.483e-4058.27Glyceraldehyde-3-phosphate dehydrogenase OS=Sordar... [more]
G3P2_DROME3.483e-4059.15Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Dros... [more]
G3P1_SCHPO3.483e-4056.43Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schi... [more]

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Properties
Property NameValue
Genbank descriptionwca07g07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07g07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135200 ID=DN135200; Name=DN135200; organism=Citrus sinensis; type=EST; length=514bp
GGGGACGACTGCTCTCCCTACTCTCTACAACTTTCTTCACCACTCATTCA
CCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGAATC
AACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCAGAG
GGACGATGTTGGACTCGTTGCTGTTAATGATCCCTTTATCACAACCGATT
ACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAGCAC
CATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAAGCC
TGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTGAGA
CTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAGGAT
AAGGCTGCTGTCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTCAGC
CCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACGAGT
ACAAACCAGAGCTC
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