DN135200

Overview
NameDN135200
Unique NameDN135200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1066 contig Csv1_Contig1066:307..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 4.549e-40
Identity = 84/139 (60.43%), Postives = 98/139 (70.50%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            VK+GINGFGRIGR+V R   +  DV +VAVNDPFI   Y  YM KYDS HG +K        D  L+ G K V  +  R+P  IPW+ETGA+Y+VESTGVFT  +KA  HLKGGAKKVIISAPS DAPM+V+GVNE  Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAHEHSDVEIVAVNDPFIEPHYAAYMLKYDSQHGNFKGDVTVEGSD--LVVGGKKVRFYTERDPAAIPWSETGADYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMYVMGVNEKTY 139          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_RHIMI (Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizomucor miehei GN=GPD PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 5.941e-40
Identity = 86/143 (60.14%), Postives = 105/143 (73.43%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            VK GINGFGRIGR+V R  L   +V +VA+NDPFI  +YM YMFKYDS HG++K   ++ KD K ++ G KP++V+  R+P  IP    GAEY+VESTGVFT K+KA  HL GGAKKVIISAPS DAPMFVVGVN   Y  ++
Sbjct:    3 VKAGINGFGRIGRIVLRASLLNPEVEVVAINDPFIDLEYMVYMFKYDSTHGRFKG-TVEAKDGKLVVNG-KPISVYAERDPCCIP-GRIGAEYIVESTGVFTTKEKAGAHLTGGAKKVIISAPSADAPMFVVGVNLESYSSDM 142          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 5.941e-40
Identity = 81/139 (58.27%), Postives = 102/139 (73.38%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            VK+GINGFGRIGR+V R  ++ DD+ +VAVNDPFI   Y  YM +YD+ HG +K   ++V D   L+   K V  +  R+P  IPW+ETGA+Y+VESTGVFT  +KA+ HLKGGAKKVIISAPS DAPM+V+GVN   Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHDDIHIVAVNDPFIEPKYAAYMLRYDTTHGNFKG-TIEV-DGADLVVNGKKVKFYTERDPAAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNETY 139          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 5.941e-40
Identity = 85/142 (59.86%), Postives = 99/142 (69.72%), Query Frame = 2
Query:   89 KIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            KIGINGFGRIGRLV R  L +    +VAVNDPFI  +YM Y+FKYDS HG++K       D   L+   K +TVF  R+P  I WA  GAEY+VESTGVFT  DKA+ H KGGAKKV+ISAPS DAPMFV GVN   Y P++
Sbjct:    3 KIGINGFGRIGRLVLRAALDKG-AEVVAVNDPFIDVNYMVYLFKYDSTHGRFKG--TVAADGGFLVVNGKKITVFCERDPTNINWASAGAEYIVESTGVFTTIDKASAHFKGGAKKVVISAPSADAPMFVCGVNLEAYSPDM 141          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_EMENI (Glyceraldehyde-3-phosphate dehydrogenase OS=Emericella nidulans GN=gpdA PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 5.941e-40
Identity = 81/142 (57.04%), Postives = 104/142 (73.24%), Query Frame = 2
Query:   89 KIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            K+GINGFGRIGR+V R  ++   V +VAVNDPFI T Y  YM KYDS HGQ+K   ++  D+  ++ G+K +     R+P  IPW + GAEY+VESTGVFT ++KA+ HLKGGAKKV+ISAPS DAPMFV+GVN   YK ++
Sbjct:    4 KVGINGFGRIGRIVFRNAIEAGTVDVVAVNDPFIETHYAAYMLKYDSQHGQFKG-TIETYDEGLIVNGKK-IRFHTERDPANIPWGQDGAEYIVESTGVFTTQEKASAHLKGGAKKVVISAPSADAPMFVMGVNNETYKKDI 143          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 7.760e-40
Identity = 81/143 (56.64%), Postives = 102/143 (71.33%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEL 514
            + +GINGFGRIGRLV RV L R D+ +VA+NDPFI  +Y  YMFKYDS H  +K  E+    +K  + G K +TVF  R+P  IPW + G +YV+ESTGVFT  + A  H+  GAKKV+I+APSKDAPMFVVGVNE +Y  +L
Sbjct:    3 ITVGINGFGRIGRLVLRVALSRADIKVVAINDPFIAPEYAAYMFKYDSTHKAYKG-EVSASGNKINIDG-KEITVFQERDPVNIPWGKAGVDYVIESTGVFTTLEGAQKHIDAGAKKVVITAPSKDAPMFVVGVNEEKYTSDL 143          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P1_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Trichoderma koningii GN=gpd1 PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 7.760e-40
Identity = 82/138 (59.42%), Postives = 103/138 (74.64%), Query Frame = 2
Query:   89 KIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEY 502
            K+GINGFGRIGR+V R  L+   V +VA+NDPFI   Y  YMFKYDS HG++K  ++KV D K L+   K +  +  R+P  IPW ++GAEY+VESTGVFT  +KA+ H KGGAKKVIISAPS DAPM+V+GVNE+ Y
Sbjct:    4 KVGINGFGRIGRVVLRNALETGAVEVVALNDPFIEPHYAEYMFKYDSTHGRFKG-DIKV-DGKDLVIDGKRIKFYQERDPANIPWKDSGAEYIVESTGVFTTTEKASAHFKGGAKKVIISAPSADAPMYVMGVNEDTY 139          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P1_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhizomucor racemosus GN=GPD1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 7.760e-40
Identity = 83/142 (58.45%), Postives = 100/142 (70.42%), Query Frame = 2
Query:   86 VKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPE 511
            V++GINGFGRIGR+V R      DV +VA+NDPFI  DYM YM KYD+VHG++    ++ KD K ++ G   + V   R+P  IPW   GA+YVVESTGVFT  + A+ HLKGGAKKVIISAPS DAPMFV GVN   YK E
Sbjct:    3 VQVGINGFGRIGRIVLRATESNKDVQVVAINDPFIPLDYMVYMLKYDTVHGRFDG-SVEAKDGKLVVNGHA-IAVSAERDPTSIPWGSAGADYVVESTGVFTTTEAASAHLKGGAKKVIISAPSADAPMFVCGVNLEAYKSE 142          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3PT_DANRE (Glyceraldehyde 3-phosphate dehydrogenase, testis-specific OS=Danio rerio GN=gapdhs PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.013e-39
Identity = 79/144 (54.86%), Postives = 108/144 (75.00%), Query Frame = 2
Query:   77 MGKVKIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKP 508
            M ++ +GINGFGRIGRLV R  LQ+  + + A+NDPFI   YM YMFKYDS HG++K  E+ ++D K ++ G+  ++VF    P EIPW + GA YVVESTGVF   +KA+ H++GGAK+V++SAPS DAPMFV+GVN+++Y P
Sbjct:    1 MSELCVGINGFGRIGRLVLRACLQKG-IKVTAINDPFIDLQYMVYMFKYDSTHGRYKG-EVHMEDGKLIVDGQA-ISVFQCMKPAEIPWGDAGALYVVESTGVFLSIEKASAHIQGGAKRVVVSAPSPDAPMFVMGVNQDKYDP 141          
BLAST of DN135200 vs. ExPASy Swiss-Prot
Match: G3P2_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schizosaccharomyces pombe GN=gpd3 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.013e-39
Identity = 81/140 (57.86%), Postives = 103/140 (73.57%), Query Frame = 2
Query:   89 KIGINGFGRIGRLVARVILQRDDVGLVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAVHLKGGAKKVIISAPSKDAPMFVVGVNENEYKP 508
            K+GINGFGRIGR+V R  +    + +VAVNDPFI  DYM YMFKYDS HG+++   ++ K  K ++ G   + V   R+P  I W+ +GAEYV+ESTGVFT K+ A+ HLKGGAK+VIISAPSKDAPMFVVGVN  ++ P
Sbjct:    5 KVGINGFGRIGRIVLRNAILTGKIQVVAVNDPFIDLDYMAYMFKYDSTHGRFEG-SVETKGGKLVIDGHS-IDVHNERDPANIKWSASGAEYVIESTGVFTTKETASAHLKGGAKRVIISAPSKDAPMFVVGVNLEKFNP 142          
The following BLAST results are available for this feature:
BLAST of DN135200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
G3P_CRYPA4.549e-4060.43Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P_RHIMI5.941e-4060.14Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizom... [more]
G3P_NEUCR5.941e-4058.27Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]
G3P_GLOMM5.941e-4059.86Glyceraldehyde-3-phosphate dehydrogenase OS=Glossi... [more]
G3P_EMENI5.941e-4057.04Glyceraldehyde-3-phosphate dehydrogenase OS=Emeric... [more]
G3P_PICPA7.760e-4056.64Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P1_TRIKO7.760e-4059.42Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Tric... [more]
G3P1_RHIRA7.760e-4058.45Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhiz... [more]
G3PT_DANRE1.013e-3954.86Glyceraldehyde 3-phosphate dehydrogenase, testis-s... [more]
G3P2_SCHPO1.013e-3957.86Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schi... [more]

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Properties
Property NameValue
Genbank descriptionwca07g07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07g07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135200 ID=DN135200; Name=DN135200; organism=Citrus sinensis; type=EST; length=514bp
GGGGACGACTGCTCTCCCTACTCTCTACAACTTTCTTCACCACTCATTCA
CCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGAATC
AACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCAGAG
GGACGATGTTGGACTCGTTGCTGTTAATGATCCCTTTATCACAACCGATT
ACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAGCAC
CATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAAGCC
TGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTGAGA
CTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAGGAT
AAGGCTGCTGTCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTCAGC
CCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACGAGT
ACAAACCAGAGCTC
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