DN135197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA1_SCHPO (40S ribosomal protein S0-A OS=Schizosaccharomyces pombe GN=rps0a PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.043e-61 Identity = 112/194 (57.73%), Postives = 145/194 (74.74%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 P L+ + DI+ +LAA H+G+KN + +M+ YV+KRR+DG++I+NLGKTWEKL +AARVI IENP D+ V S R YG RAVLKFA +T A AIAGR TPG FTN + ++ EPRL+++TDPR D Q IKEA+ N P IA CDTDS + +VDI IP NNKG+ SIG +++LLAR VL++RGT+ WDVM Sbjct: 7 PNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAARVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREVLRVRGTLSRSAPWDVM 200
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_YARLI (40S ribosomal protein S0 OS=Yarrowia lipolytica GN=RPS0 PE=3 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 1.124e-60 Identity = 110/186 (59.14%), Postives = 143/186 (76.88%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVM 684 DIQ +LAA+ H+G+KN Q YVFK+R DG+ IIN+GKTWEK+Q+AAR+I A+ NP D++ SAR YGQRAVLKFA + A AIAGR TPG+FTN + SF EPRLLI+TDPRTDHQ IKEA+ N P IA DTDSP+ +VD+ IP NNKG+HS+G ++W+++R VL++RG + + +W VM Sbjct: 12 DIQNLLAAQTHIGSKNVQVQNIPYVFKQRADGVNIINVGKTWEKIQLAARIIAAVPNPADVVAISARTYGQRAVLKFANHCGATAIAGRFTPGSFTNYITRSFKEPRLLIVTDPRTDHQAIKEASYVNIPVIALVDTDSPVEFVDVAIPCNNKGRHSVGLVWWMISREVLRLRGALEDRNTEWSVM 197
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA2_SCHPO (40S ribosomal protein S0-B OS=Schizosaccharomyces pombe GN=rps0b PE=1 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.467e-60 Identity = 115/194 (59.28%), Postives = 145/194 (74.74%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 P L+ + DI+ +LAA+ H+G+KN + +ME YV+KRR+DGI+IINLGKTWEKL +AARVI IENP D+ V S+RPYG RAVLKFA +T A AIAGR TPG FTN + ++ EPRL+I+TDPR D Q IKEA+ N P IA CDTDS + +VD+ IP NNKG SIG ++LLAR VL++RG I W+VM Sbjct: 8 PSVLNATDDDIKNLLAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWEKLVLAARVIATIENPADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDVAIPINNKGYKSIGLAWYLLAREVLRLRGNISRTTAWEVM 201
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_DICDI (40S ribosomal protein SA OS=Dictyostelium discoideum GN=rpsA PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.512e-60 Identity = 116/195 (59.49%), Postives = 140/195 (71.79%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 P L+ + DI MLA + HLG N D +ME Y +KR+++G +IINL KTWEK+Q+AARVIVAIENP DI V SA+P GQRAVLKFA + A A +GR TPGTFTNQ+Q+ F EPRLLI+ DP D QP+ EA+ N PTIA CDT S + VDI IP NN+GK+SI +FWLLAR VL +RGTI W V V Sbjct: 5 PAALNPHQDDILKMLACQTHLGGNNVDVEMESYTWKRKDNGHFIINLAKTWEKIQLAARVIVAIENPADISVISAKPLGQRAVLKFANFIGATAFSGRFTPGTFTNQIQSKFTEPRLLIVADPLLDKQPLMEASYVNIPTIALCDTTSCLDGVDIAIPCNNRGKNSIALMFWLLAREVLYLRGTIPRNTTWSVKV 199
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_USTMA (40S ribosomal protein S0 OS=Ustilago maydis GN=RPS0 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.622e-59 Identity = 105/183 (57.38%), Postives = 140/183 (76.50%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 651 P L+ E DI ++LAA+ H+GTKN D QM Y++KRR DGI+++N+GKTWEK+ AAR++ AIENP DI V S R YG RAVLKFA T A AIAGR TPG+FTN + SF EPR++++TDPR DHQ I+EA+ N P I+F D+DSP+++VD+ IP N +G+HS+G L+WLL R VL+++G Sbjct: 5 PAALNPTEEDISLLLAAQTHIGTKNADKQMAPYIYKRRADGIHLLNIGKTWEKIVFAARILAAIENPADICVISGRQYGHRAVLKFAAQTGATAIAGRFTPGSFTNYITRSFKEPRVIVVTDPRVDHQAIREASYVNIPCISFVDSDSPLKFVDVAIPGNVRGRHSVGLLWWLLCRTVLRIKG 187
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_CHLVR (40S ribosomal protein SA OS=Chlorohydra viridissima PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.165e-59 Identity = 114/191 (59.69%), Postives = 140/191 (73.30%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 LS KE D+ LAA VHLG+ N + YVFKR++DGI+IINL KTWEKL +AAR+I +IENP D+ V S+RPYG RAVLKFA+ T A IAGR TPGTFTNQ+Q F EPRLLI TDP+ D+Q + EA+ N P IA C+TDSP+R+VD IP NN+G SIG ++W+LAR VL +RG I W+VM Sbjct: 8 LSLKEEDVVKFLAAGVHLGSTNVGSSCQGYVFKRKSDGIHIINLRKTWEKLILAARIIASIENPADVCVISSRPYGTRAVLKFAQSTGAIPIAGRFTPGTFTNQIQKRFREPRLLISTDPQHDNQALTEASYVNIPVIALCNTDSPLRFVDCAIPCNNRGIQSIGTMWWILAREVLHLRGIISRKTPWNVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_BRUMA (40S ribosomal protein SA OS=Brugia malayi GN=Bm1_41245 PE=3 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 8.052e-59 Identity = 107/177 (60.45%), Postives = 135/177 (76.27%), Query Frame = 1 Query: 121 KEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 651 KE D +LA + H+G NCDFQME+YV+KRR DGI+II+L KTWEKL +AAR I AI+NPGD+ V SARPY QRA+LKFA +T + I GR TPG TNQ+Q F EPRLLI++DPR DHQ + EA+ P I+FC+TDSP++++DI IP NNKG SIG ++WLLAR VL ++G Sbjct: 11 KEEDAIKLLACQTHVGAANCDFQMEQYVWKRRADGIHIIHLRKTWEKLLLAARAIAAIDNPGDVCVVSARPYAQRALLKFAAHTGSTPIFGRFTPGCLTNQIQKQFKEPRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFIDIAIPCNNKGVQSIGLMWWLLAREVLLIKG 187
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_THEAN (40S ribosomal protein SA OS=Theileria annulata GN=TA10185 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.996e-58 Identity = 107/198 (54.04%), Postives = 141/198 (71.21%), Query Frame = 1 Query: 94 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 A +L+ E I+MML A+VH+GTKN + +M +YV+ R +G+++INL T EKL++AAR IV + NP +++V SARPYG RAVLKF+ Y +H IAGR PGT TNQ+ F EPRLL+ TDPRTD Q +KE++ + P IA CDTDSP+ YVDI IP NNKGK SI ++WLLAR VL +R ++ WDV+V Sbjct: 2 AAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTDAQSLKESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLV 199
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_THEPA (40S ribosomal protein SA OS=Theileria parva GN=TP04_0748 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.903e-58 Identity = 106/198 (53.54%), Postives = 141/198 (71.21%), Query Frame = 1 Query: 94 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 A +L+ E I+MML A+VH+GTKN + +M +YV+ R +G+++INL T EKL++AAR IV + NP +++V SARPYG RAVLKF+ Y +H IAGR PGT TNQ+ F EPRLL+ TDPRTD Q ++E++ + P IA CDTDSP+ YVDI IP NNKGK SI ++WLLAR VL +R ++ WDV+V Sbjct: 2 AAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLV 199
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_MONBE (40S ribosomal protein SA OS=Monosiga brevicollis GN=30792 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.590e-57 Identity = 103/192 (53.65%), Postives = 141/192 (73.44%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTH-AHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 L EADIQ +L A+VHLG NC M +YV+KRR+DG+ +I+L KT+EK+ +AAR+I A+++P ++ S R +GQRA+LKF + A IAGR TPG FTNQ+Q +F EPRLL+LTDP DHQ ++EA+ N P I+ CD D+P+RYVD+ IP NNK H+IG ++W+LAR VL++RGT+ +WDVM Sbjct: 8 LKPTEADIQKLLMAKVHLGASNCTTAMSKYVYKRRSDGVNVIDLNKTYEKIVLAARIIAAVDSPANVCAISGRNFGQRAILKFCNHIGGAFPIAGRFTPGAFTNQIQKAFQEPRLLVLTDPLVDHQAVREASYVNIPIISLCDVDAPLRYVDVVIPCNNKSPHAIGIVWWMLAREVLRLRGTLPRDAEWDVM 199 The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bpback to top |