DN135197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_CAEBR (40S ribosomal protein SA OS=Caenorhabditis briggsae GN=rps-0 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.740e-56 Identity = 100/178 (56.18%), Postives = 136/178 (76.40%), Query Frame = 1 Query: 124 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 E D+ +LA + HLG+ N +FQM++YV+KRR DG IIN+ KTWEKL +AAR I A+ENP D++V SARPY QRA+LKFA +T A AI GR +PG TNQ+Q +F EPRLL+++DPR DHQ + EA+ P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I Sbjct: 12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKI 189
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_CANDC (40S ribosomal protein S0 OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=RPS0 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 4.885e-56 Identity = 109/195 (55.90%), Postives = 136/195 (69.74%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVM 684 P D +++LAA VHLG KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ N P IA D DSP YVD+ IP NNKGKHSIG ++WL+AR VL++RG I +W VM Sbjct: 4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLIAREVLRLRGIIPDRTTEWSVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_CANTR (40S ribosomal protein S0 OS=Candida tropicalis GN=RPS0 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 6.380e-56 Identity = 110/195 (56.41%), Postives = 135/195 (69.23%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVM 684 P D +++LA VHLG+KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I AI N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ N P IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL+ RG I +W VM Sbjct: 4 PASFDLTPEDAKLLLAGNVHLGSKNVQVHNKPYVYKTRPDGVNIINIGKTWEKIVLAARIIAAIPNANDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRSRGIIPDRTTEWSVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_KLULA (40S ribosomal protein S0 OS=Kluyveromyces lactis GN=RPS0 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.088e-55 Identity = 104/185 (56.22%), Postives = 133/185 (71.89%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 P D Q++LAA VHLG KN E YV+K R DG+ +IN+GKTWEK+ +AAR+I AI NP D++ S+R YGQRAVLK+A +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKE++ N P IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + Sbjct: 4 PSTFDLTSEDAQLLLAARVHLGAKNVQVHQEPYVYKARPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVVAISSRTYGQRAVLKYAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKESSYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGAL 188
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_PICGU (40S ribosomal protein S0 OS=Pichia guilliermondii GN=RPS0 PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.856e-55 Identity = 110/195 (56.41%), Postives = 135/195 (69.23%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVM 684 P D +++LAA VHLG+KN + YV+K R DG+ +IN+GKTWEK+ +AAR I AI N D+ V S+R +GQRAVLKFA +T A IAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ N P IA D DSP YVDI IP NNKGKHSIG ++WLLAR VL++RG I +W VM Sbjct: 4 PASFDLTAEDAKLLLAANVHLGSKNVIVHNKPYVYKTRPDGVNVINIGKTWEKIVLAARTIAAIPNAADVAVCSSRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPTDYVDIAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDRSTEWSVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_DEBHA (40S ribosomal protein S0 OS=Debaryomyces hansenii GN=RPS0 PE=3 SV=3) HSP 1 Score: 215.312 bits (547), Expect = 2.424e-55 Identity = 106/186 (56.99%), Postives = 134/186 (72.04%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVM 684 D +++LAA VHLG+KN + YV+K R DG+ +IN+GKTWEK+ +AAR+I AI N D+ V S R +GQRAVLKFA +T A IAGR TPG FTN + SF EPRL+++TDPRTD Q IKE++ N P IA D DSP YVD+ IP NNKGKHSIG ++WL+AR VL++RG I +W VM Sbjct: 13 DAKLLLAANVHLGSKNVQVHNKPYVYKTRPDGVNVINVGKTWEKIVLAARIIAAIPNAADVAVCSTRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDFQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLVAREVLRLRGIIPDRTTEWSVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA2_YEAST (40S ribosomal protein S0-B OS=Saccharomyces cerevisiae GN=RPS0B PE=1 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.424e-55 Identity = 105/186 (56.45%), Postives = 133/186 (71.51%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR D Q IKEA+ N P IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA2_YEAS7 (40S ribosomal protein S0-B OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS0B PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.424e-55 Identity = 105/186 (56.45%), Postives = 133/186 (71.51%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR D Q IKEA+ N P IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA2_YEAS1 (40S ribosomal protein S0-B OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS0B PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.424e-55 Identity = 105/186 (56.45%), Postives = 133/186 (71.51%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR D Q IKEA+ N P IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAST (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae GN=RPS0A PE=1 SV=3) HSP 1 Score: 214.542 bits (545), Expect = 4.135e-55 Identity = 104/186 (55.91%), Postives = 134/186 (72.04%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ N P IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198 The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bpback to top |