DN135197

Overview
NameDN135197
Unique NameDN135197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAS7 (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS0A PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.135e-55
Identity = 104/186 (55.91%), Postives = 134/186 (72.04%), Query Frame = 1
Query:  130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684
            D Q++LAA  HLG +N     E YVF  R DG+++IN+GKTWEKL +AAR+I AI NP D++  S+R +GQRAVLKFA +T A  IAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKEA+  N P IA  D DSP  +VD+ IP NN+GKHSIG +++LLAR VL++RG  +     W +M
Sbjct:   13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAS1 (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS0A PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.135e-55
Identity = 104/186 (55.91%), Postives = 134/186 (72.04%), Query Frame = 1
Query:  130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684
            D Q++LAA  HLG +N     E YVF  R DG+++IN+GKTWEKL +AAR+I AI NP D++  S+R +GQRAVLKFA +T A  IAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKEA+  N P IA  D DSP  +VD+ IP NN+GKHSIG +++LLAR VL++RG  +     W +M
Sbjct:   13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_ZYGRC (40S ribosomal protein S0 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.401e-55
Identity = 105/186 (56.45%), Postives = 134/186 (72.04%), Query Frame = 1
Query:  130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684
            D Q++LAA  HLG +N     E YVFK R DG+ ++++GKTWEKL +AAR+I AI NP DI+  S+R +GQRAVLKF+ +T A  IAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKEA+  N P IA  D DSP  YVD+ IP NN+GKHSIG +++LLAR VL++RG  +     W VM
Sbjct:   13 DAQLLLAANTHLGARNVQVHQEPYVFKTRPDGVNVVDVGKTWEKLVLAARIIAAIPNPEDIVAISSRTFGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSVM 198          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_ASHGO (40S ribosomal protein S0 OS=Ashbya gossypii GN=RPS0 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.203e-54
Identity = 104/186 (55.91%), Postives = 136/186 (73.12%), Query Frame = 1
Query:  130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684
            D Q++LAA VHLG+KN     E Y++K R DG+ II++GKTWEK+ +AAR+I AI N  D++  S+R YGQRAVLKF+ +T A AIAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKEA+  N P IA  D +SP  YVD+ IP NN+GKHSIG +++LLAR VL++RG  +     W +M
Sbjct:   13 DAQLLLAANVHLGSKNVQVHQEPYLYKTRPDGVNIIHIGKTWEKIVLAARIIAAIPNAEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLESPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA2_VANPO (40S ribosomal protein S0-B OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0B PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.571e-54
Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 1
Query:  130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657
            D Q++LAA  HLG +N     E YVF  R DG+ +IN+GKTWEK+ +AAR+I AI NP D+   S+R YGQRAVLKF+ +T A  IAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKEA+  N P IA  D DSP  YVD+ IP NN+GKHSIG +++LLAR VL++RG +
Sbjct:   13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGAL 188          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA1_VANPO (40S ribosomal protein S0-A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0A PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.571e-54
Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 1
Query:  130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657
            D Q++LAA  HLG +N     E YVF  R DG+ +IN+GKTWEK+ +AAR+I AI NP D+   S+R YGQRAVLKF+ +T A  IAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKEA+  N P IA  D DSP  YVD+ IP NN+GKHSIG +++LLAR VL++RG +
Sbjct:   13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGAL 188          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_LEIIN (40S ribosomal protein SA OS=Leishmania infantum GN=LinJ36.5570 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.501e-54
Identity = 102/201 (50.75%), Postives = 138/201 (68.66%), Query Frame = 1
Query:   85 TGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687
            T   +  + L  KE+D Q +LA   H+GT+N    M++Y++ R  +G +II+L   WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++       GR  PGTFTNQ+Q  F +PR+L++TDPRTDHQ I+EA+L N P IA CDTD+P+ YVDI IP NN+G  SIG ++WLLAR VL++RGTI     W+  V
Sbjct:    2 TAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDLHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKV 202          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_LEIMA (40S ribosomal protein SA OS=Leishmania major GN=LmjF36.5010 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.269e-53
Identity = 100/192 (52.08%), Postives = 135/192 (70.31%), Query Frame = 1
Query:  112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687
            L  KE+D Q +LA   H+GT+N    M++Y++ R  +G +II++   WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++       GR  PGTFTNQ+Q  F +PR+L++TDPRTDHQ I+EA+L N P IA CDTD+P+ YVDI IP NN+G  SIG ++WLLAR VL++RGTI     W+  V
Sbjct:   11 LRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKV 202          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_LEIBR (40S ribosomal protein SA OS=Leishmania braziliensis GN=LbrM35_V2.5370 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.964e-53
Identity = 100/201 (49.75%), Postives = 138/201 (68.66%), Query Frame = 1
Query:   85 TGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687
            T   +  + L  KE+D Q +LA   H+GT+N    M++Y++ R  +G +II++   WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++       GR  PGTFTNQ+Q  F +PR+L++TDPRTDHQ I+EA+L N P IA CDTD+P+ +VDI IP NN+G  SIG ++WLLAR VL++RGTI     W+  V
Sbjct:    2 TAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMLWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFMQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLDFVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKV 202          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_GIALA (40S ribosomal protein SA OS=Giardia lamblia GN=GL50803_7766 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.921e-52
Identity = 94/197 (47.72%), Postives = 136/197 (69.04%), Query Frame = 1
Query:   91 TATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDV 681
            T+ A ++   KEAD++ ML A  HLG +N D +M+ Y+F R+ DG ++ NL K W K+  AAR++V I++P +I V + RP  QRA+LKF KYTHA A  GR  PG FTN+M  ++ EPRLL++ DP  D Q I EA+  N PTI+ C++D+ ++++D+ IP NNK   SIG ++WLLAR VL+++G+I    +WDV
Sbjct:    6 TSQASKEYQLKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTIDDPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVVDRQAILEASYVNIPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLRLKGSISRTEEWDV 202          
The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA1_YEAS74.135e-5555.9140S ribosomal protein S0-A OS=Saccharomyces cerevi... [more]
RSSA1_YEAS14.135e-5555.9140S ribosomal protein S0-A OS=Saccharomyces cerevi... [more]
RSSA_ZYGRC5.401e-5556.4540S ribosomal protein S0 OS=Zygosaccharomyces roux... [more]
RSSA_ASHGO1.203e-5455.9140S ribosomal protein S0 OS=Ashbya gossypii GN=RPS... [more]
RSSA2_VANPO1.571e-5457.9540S ribosomal protein S0-B OS=Vanderwaltozyma poly... [more]
RSSA1_VANPO1.571e-5457.9540S ribosomal protein S0-A OS=Vanderwaltozyma poly... [more]
RSSA_LEIIN3.501e-5450.7540S ribosomal protein SA OS=Leishmania infantum GN... [more]
RSSA_LEIMA2.269e-5352.0840S ribosomal protein SA OS=Leishmania major GN=Lm... [more]
RSSA_LEIBR2.964e-5349.7540S ribosomal protein SA OS=Leishmania braziliensi... [more]
RSSA_GIALA1.921e-5247.7240S ribosomal protein SA OS=Giardia lamblia GN=GL5... [more]

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Properties
Property NameValue
Genbank descriptionwca07g03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07g03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bp
GGGGATCCAGCCAGCGAGCAGAAGTCTCCGTCGGTACCACGNGTCTCAGC
TTTCTCTCGCAGGTTTTGAGAAATAAAGATGGCGACCGGAACAGCAACGG
CCCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGTTAGCC
GCCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAACGTTA
CGTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGGCAAGA
CTTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTGAAAAC
CCTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGAGCTGT
GTTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAGACACA
CTCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGCCCCGA
CTTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAGGAAGC
TGCTCTTGGAAACACTCCCACCATTGCCTTTTGTGACACTGACTCACCTA
TGCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAACACAGC
ATTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATGCGCGG
CACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTC
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