DN135197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAS7 (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS0A PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.135e-55 Identity = 104/186 (55.91%), Postives = 134/186 (72.04%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ N P IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAS1 (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS0A PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.135e-55 Identity = 104/186 (55.91%), Postives = 134/186 (72.04%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ N P IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_ZYGRC (40S ribosomal protein S0 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS0 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.401e-55 Identity = 105/186 (56.45%), Postives = 134/186 (72.04%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684 D Q++LAA HLG +N E YVFK R DG+ ++++GKTWEKL +AAR+I AI NP DI+ S+R +GQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ N P IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W VM Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFKTRPDGVNVVDVGKTWEKLVLAARIIAAIPNPEDIVAISSRTFGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_ASHGO (40S ribosomal protein S0 OS=Ashbya gossypii GN=RPS0 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.203e-54 Identity = 104/186 (55.91%), Postives = 136/186 (73.12%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVM 684 D Q++LAA VHLG+KN E Y++K R DG+ II++GKTWEK+ +AAR+I AI N D++ S+R YGQRAVLKF+ +T A AIAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ N P IA D +SP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M Sbjct: 13 DAQLLLAANVHLGSKNVQVHQEPYLYKTRPDGVNIIHIGKTWEKIVLAARIIAAIPNAEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLESPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA2_VANPO (40S ribosomal protein S0-B OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0B PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.571e-54 Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 D Q++LAA HLG +N E YVF R DG+ +IN+GKTWEK+ +AAR+I AI NP D+ S+R YGQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ N P IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGAL 188
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA1_VANPO (40S ribosomal protein S0-A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0A PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.571e-54 Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 D Q++LAA HLG +N E YVF R DG+ +IN+GKTWEK+ +AAR+I AI NP D+ S+R YGQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ N P IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGAL 188
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_LEIIN (40S ribosomal protein SA OS=Leishmania infantum GN=LinJ36.5570 PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.501e-54 Identity = 102/201 (50.75%), Postives = 138/201 (68.66%), Query Frame = 1 Query: 85 TGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 T + + L KE+D Q +LA H+GT+N M++Y++ R +G +II+L WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L N P IA CDTD+P+ YVDI IP NN+G SIG ++WLLAR VL++RGTI W+ V Sbjct: 2 TAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDLHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKV 202
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_LEIMA (40S ribosomal protein SA OS=Leishmania major GN=LmjF36.5010 PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.269e-53 Identity = 100/192 (52.08%), Postives = 135/192 (70.31%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 L KE+D Q +LA H+GT+N M++Y++ R +G +II++ WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L N P IA CDTD+P+ YVDI IP NN+G SIG ++WLLAR VL++RGTI W+ V Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKV 202
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_LEIBR (40S ribosomal protein SA OS=Leishmania braziliensis GN=LbrM35_V2.5370 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.964e-53 Identity = 100/201 (49.75%), Postives = 138/201 (68.66%), Query Frame = 1 Query: 85 TGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 T + + L KE+D Q +LA H+GT+N M++Y++ R +G +II++ WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L N P IA CDTD+P+ +VDI IP NN+G SIG ++WLLAR VL++RGTI W+ V Sbjct: 2 TAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMLWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFMQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLDFVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKV 202
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_GIALA (40S ribosomal protein SA OS=Giardia lamblia GN=GL50803_7766 PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.921e-52 Identity = 94/197 (47.72%), Postives = 136/197 (69.04%), Query Frame = 1 Query: 91 TATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDV 681 T+ A ++ KEAD++ ML A HLG +N D +M+ Y+F R+ DG ++ NL K W K+ AAR++V I++P +I V + RP QRA+LKF KYTHA A GR PG FTN+M ++ EPRLL++ DP D Q I EA+ N PTI+ C++D+ ++++D+ IP NNK SIG ++WLLAR VL+++G+I +WDV Sbjct: 6 TSQASKEYQLKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTIDDPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVVDRQAILEASYVNIPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLRLKGSISRTEEWDV 202 The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bpback to top |