DN135197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_METS5 (30S ribosomal protein S2P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps2p PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.521e-36 Identity = 79/191 (41.36%), Postives = 120/191 (62.83%), Query Frame = 1 Query: 109 QLSQKEADIQMM------LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 Q +K A I+++ L+A VH+GT C MER++++ R +G+Y++++ K E+L++AA+ + + P I+ ++RPY V KFA+ A A+ GR PG TN F EP +L+++DPRTD Q IKEAA P +AF DTD+ + YVD+ IP+NNKG+ S+ L+W LAR +L+ R I P Sbjct: 19 QRGEKGAIIELLVPLENYLSAGVHIGTHTCTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFLSRFQ-PQSILAVASRPYAFTPVQKFAEVVGARAVVGRMVPGMLTNPYLEDFIEPEVLLVSDPRTDTQAIKEAADMGIPVVAFSDTDAKVDYVDLVIPSNNKGRKSLALLYWALARQILRERKEIAP 208
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_THEPD (30S ribosomal protein S2P OS=Thermofilum pendens (strain Hrk 5) GN=rps2p PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36 Identity = 80/198 (40.40%), Postives = 117/198 (59.09%), Query Frame = 1 Query: 70 EIKMATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 E+K+ G P ++M LAA + +GTK ME +++ R DG+Y++++ KT E++++AA++I + P +V S R YG R V KF + GR PGTFTN + F E L+++TDPR D Q + EA P IA CDTDSP+ VD+ IP NN+G+ ++ +FWLLAR VL++RG I P Sbjct: 5 ELKLLEGQLLIP---------LEMYLAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARYD-PSKFVVVSGRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRVDEQAVVEAGTMGIPVIALCDTDSPISNVDLIIPTNNRGRKALALIFWLLAREVLRIRGDIPP 192
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_METST (30S ribosomal protein S2P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps2p PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.615e-36 Identity = 73/190 (38.42%), Postives = 119/190 (62.63%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDV 681 +S+ + LAA +H+GT+ ME+Y+++ R DG++++++ + +K+ +AA+++ E P DI+V S R YGQ V KF + T I GR PGT TN F EP++L++TDPR+D Q + EA P +A CDT++ + VD+ IP NNKG+ +I ++WLLAR +L+ RG + ++D+ Sbjct: 1 MSELLIPLDKYLAAGLHIGTQQKTKDMEKYIYRVRADGLHVLDVKSSNDKIIVAAKLLSKYE-PDDILVVSTRQYGQSPVKKFGEVTGTKTIPGRFIPGTLTNPQYAKFIEPKILVVTDPRSDSQAVIEAKQNGIPVVALCDTENLLCNVDVVIPVNNKGRKAIALVYWLLARQILRERGILSSDEEFDL 189
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_SULTO (30S ribosomal protein S2P OS=Sulfolobus tokodaii GN=rps2p PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.334e-36 Identity = 80/194 (41.24%), Postives = 120/194 (61.86%), Query Frame = 1 Query: 100 APRQLSQKEADIQMM------LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 A Q S+K A I+++ L+A VH+GT C ME++V++ R +G+Y++++ K E+L++AAR + P +I+ ++RPY V KFA+ AI GR PG TN + EP +++ TDPRTD Q IKEA+ P +AF DTD+ + +VD IPANNKG+ S+ L+W+LAR +L+ R I P Sbjct: 16 AELQKSEKGAVIELLVPLDTYLSAGVHIGTHTCTKYMEKFVYRVRPEGLYVLDVRKIDERLRIAARFLSRF-TPENILAVTSRPYAFTPVTKFAEVIRGRAIVGRFPPGILTNPQLPNHIEPEVIVATDPRTDLQAIKEASKVGIPVVAFADTDAKVDFVDFIIPANNKGRKSLALLYWVLARQILRERREIPP 208
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_METTH (30S ribosomal protein S2P OS=Methanobacterium thermoautotrophicum GN=rps2p PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.578e-36 Identity = 75/190 (39.47%), Postives = 115/190 (60.53%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDV 681 +S+ + LAA +H+GT+ ME+Y+++ R+DG+Y++++ KT +++ A++ + E P DI+ S R YGQ V KF + T A I GR PGT TN F EP +L+ TDPR+D Q I EA P +A CDT++ + VDI IP NNKG+ +I ++WLLAR L+ +G ++ D+ Sbjct: 1 MSELLIPLDKYLAAGLHIGTQQKTADMEKYIYRVRSDGLYVLDIRKTNDRVIAASKFLSKYE-PDDILAVSTRQYGQEPVRKFGEVTGARTIPGRFIPGTLTNPNYAKFIEPEVLVATDPRSDSQAIIEAKQIGIPVVALCDTENLLGNVDIAIPVNNKGRKAIALVYWLLARQFLREKGILKEDEDLDI 189
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_HYPBU (30S ribosomal protein S2P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps2p PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.634e-35 Identity = 73/175 (41.71%), Postives = 110/175 (62.86%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 ++ L+A VH+GT C M ++V++ R DG+YI+++ KT E+L++AA+ + E P I+ S R YGQR V KF Y AI GR PGTFTN + EP ++++TDPR D Q + EAA P +A DTD+ + +D+ IP NNKG+ S+ ++W+L R +L+ +G I Sbjct: 23 LERYLSAGVHIGTHICTAYMRKFVYRVRPDGLYILDIRKTDERLRVAAKFLARFE-PSKIVAVSVRQYGQRPVQKFCTYIGCKAITGRILPGTFTNPSLEWYVEPDVIVVTDPRADSQAVDEAARMGIPVVALTDTDNRVENIDLVIPVNNKGRKSLALVYWILTREILREQGKI 196
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_THEAC (30S ribosomal protein S2P OS=Thermoplasma acidophilum GN=rps2p PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.059e-34 Identity = 76/167 (45.51%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 157 VHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 VH+GT+ M+ Y+FK RNDG+YI+++ KT KL +A +++ E P DI+V + R Y R V KFA+ T A AI GR PGT TN + E +++I+TDP D Q +KEA P IA CD ++ +VD+ IP NNKG+ S+ ++WLLAR +L+ RGTI Sbjct: 17 VHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFE-PQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDPLADVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREILKNRGTI 182
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_SULAC (30S ribosomal protein S2P OS=Sulfolobus acidocaldarius GN=rps2p PE=3 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.059e-34 Identity = 72/171 (42.11%), Postives = 112/171 (65.50%), Query Frame = 1 Query: 145 LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 L+A VH+GT C MER++++ R +G+Y++++ K E+L++AA+ I P ++ ++RPY V KF++ I+GR PGT TN ++ EP +LI+TDPRTD Q IKEA+ P +AF DTD+ + ++D+ IPANNKG+ S+ L+W+LAR +L+ R I Sbjct: 37 LSAGVHIGTHTCTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFISRFR-PEAVLTVASRPYAFTPVQKFSEVVRGKEISGRFPPGTLTNPYLDNYIEPEVLIVTDPRTDLQAIKEASKVGIPIVAFTDTDARVDFIDVIIPANNKGRKSLALLYWVLARQILRERKEI 206
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_ENTBH (40S ribosomal protein S0 OS=Enterocytozoon bieneusi (strain H348) GN=RPS0 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34 Identity = 70/167 (41.92%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 136 QMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMV 636 +++LA + HLG M++Y++ R D + + +L KTW+K +AAR + D+ V S + +G++ VLKFA+ T A + GR PG+FTN + EPRL+I++DP D Q I+EAA N PTIAFC+TD ++YVDI IP NN+ +IG F++L+R++ Sbjct: 14 KLLLATQAHLGGVKVTKPMKKYIYGERQDKVSVFDLKKTWDKFILAARAFCGLNYGDDVTVISCKTFGKKPVLKFAETTGAKSYTGRFIPGSFTNTTIRNSCEPRLIIVSDPIVDKQAIEEAAKVNCPTIAFCNTDCDLKYVDIAIPLNNRSPKAIGASFFILSRII 180
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_METKA (30S ribosomal protein S2P OS=Methanopyrus kandleri GN=rps2p PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.965e-34 Identity = 72/178 (40.45%), Postives = 113/178 (63.48%), Query Frame = 1 Query: 145 LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWD 678 LAA VH+GT+ ME ++++ R DG+++I++ KT E++++AA + ++ N +I+V S R YGQ+ V KFA+ T AI GR PGT TN + EP +++LTDPR D Q + EA P +A CDTD+ VD+ IP NNKG+ ++ ++WLLAR +L+ G + +++ Sbjct: 15 LAAGVHIGTQQKTKDMEPFIYRTRADGLHVIDVRKTDERIRIAANFL-SMYNTDEILVVSRRYYGQKPVSKFAEATGTTAIPGRFVPGTLTNPEYDGYLEPEVIVLTDPRADFQALVEAQSVGIPIVALCDTDNFTGNVDLAIPTNNKGRKALALVYWLLARELLKKLGRLEEDEEFE 191 The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bpback to top |