DN135197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_IGNH4 (30S ribosomal protein S2P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps2p PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.171e-33 Identity = 76/178 (42.70%), Postives = 110/178 (61.80%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRN-DGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 ++M L VH+GTK M+R+V+KRRN DG+ I+++ K +++++AA+ + E P I+V S R YG + V FA++T A + GR PGT TN + EP ++++TD R D Q I EAA P +A CDTD+ VD+ IP NNKG+ S+ L+WLL R VL RG + P Sbjct: 16 LEMYLQHGVHIGTKMVTNYMKRFVYKRRNIDGLAILDVRKIDQRIRVAAKFLSRFE-PEKIMVVSVRQYGHKPVTMFAQFTGAKPVIGRFVPGTLTNPALEVYYEPDVILVTDTRMDQQAIVEAAEIGIPVVAICDTDNKTENVDLIIPGNNKGRKSLALLYWLLTRQVLVERGQLSP 192
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_THEVO (30S ribosomal protein S2P OS=Thermoplasma volcanium GN=rps2p PE=3 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33 Identity = 73/167 (43.71%), Postives = 106/167 (63.47%), Query Frame = 1 Query: 157 VHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 VH+GT+ M+ Y+FK RNDG+YI+++ KT KL A +++ + P DI+V + R Y R V KFA+ T A +I GR PGT TN + E +++++TDP D Q +KEA P IA CD ++ +VD+ IP NNKG+ S+ ++WLLAR +L+ RGTI Sbjct: 17 VHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIAAGKMLARFD-PQDILVVAQRQYAFRPVAKFAEVTGAVSITGRFNPGTLTNPSLKFYKEVKVIVVTDPLADVQAMKEAIKIGIPIIALCDANNKTDFVDLVIPTNNKGRRSLAVIYWLLAREILKNRGTI 182
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_METJA (30S ribosomal protein S2P OS=Methanocaldococcus jannaschii GN=rps2p PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.449e-33 Identity = 69/184 (37.50%), Postives = 112/184 (60.87%), Query Frame = 1 Query: 112 LSQKE--ADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 +S+KE + LA+ +H+GT+ ME+++++ R+DG+Y++++ KT E+L++AA+ + E P DI+ S R Y + +F KYT +AGR PGT TN F EP ++ ++DPR D Q +KEA P + CDT+ ++D+ IP NNKGK ++ +++LL R L+ RG I Sbjct: 1 MSEKELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVI 183
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_PYRAR (30S ribosomal protein S2P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps2p PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32 Identity = 73/179 (40.78%), Postives = 106/179 (59.22%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMER--YVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 ++ L+A V LGT+ + +E ++F R DG+ I ++ K E+L++AAR I P ++V + RPYG + V F KY A+ GR PGT TN + E LL + DP+ D Q + EAA P IA DTD+P +Y+D IP NNKG+ S+ +FW+LAR VL+ RG ++P Sbjct: 13 LEKYLSAGVRLGTRLSNKYLEDRGFIFAVRPDGLRIFDIKKIDERLKIAARFIARYP-PDRVLVHTTRPYGFKPVQMFCKYVGCKALTGRFIPGTLTNPNLPHYQEADLLFVVDPKLDAQAVAEAAKMGVPVIALVDTDTPHQYIDFMIPCNNKGRKSLALIFWILARQVLRERGELKP 190
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_METTP (30S ribosomal protein S2P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps2p PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32 Identity = 71/173 (41.04%), Postives = 105/173 (60.69%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 651 I LAA VH+GT+ M +Y+++ R DG+Y++++ T +++++A + + E P I+V SAR YGQR FAK A A GR P T TN + EP +L++TDP D Q +KEA P +A CDT++ VD+ IP NNKG+ ++ ++WLLAR VL+ RG Sbjct: 19 IDEYLAAGVHIGTQQKTSDMMKYIYRVRTDGLYVLDVQATDKRIRLAGKFLANYE-PSKILVVSARQYGQRPATMFAKAVGARANVGRFIPNTLTNPHFAGYIEPDVLLVTDPAGDGQAVKEAVDIGIPVVALCDTNNMTSNVDLVIPTNNKGRKALTLIYWLLARQVLRERG 190
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_PYRIL (30S ribosomal protein S2P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps2p PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.869e-31 Identity = 71/179 (39.66%), Postives = 108/179 (60.34%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMER--YVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 ++ L+A V LGT+ + +E +++ R DG+ I ++ K E+L++AA+ I + P I+V + RPYG + V F K+ A+ GR PGT TN ++ E LL + DP+ D Q + EAA P IA DTD+P +Y+D IP NNKG+ S+ +FW+LAR VL+ RG ++P Sbjct: 13 LEKYLSAGVRLGTRLSNKYLEERGFIYAVRPDGLRIFDIKKIDERLRIAAKFISRYQ-PDRILVHTTRPYGFKPVQMFCKFVGCRALTGRFIPGTLTNPYLPNYTEIDLLFVVDPKLDAQAVAEAAKMGIPIIALVDTDTPHQYIDFMIPCNNKGRRSLALIFWILARQVLRERGELKP 190
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_THENV (30S ribosomal protein S2P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps2p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.188e-31 Identity = 68/179 (37.99%), Postives = 107/179 (59.78%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMER--YVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 ++ L+A V LGT+ + +E ++F R DG+ I ++ K E+L++AA+ I P ++V + RPYG + V F K+ A+ GR PGT TN + E LL + DP+ D Q + EAA P +A DTD+P +Y+D+ +P NNKG+ S+ +FW+LAR +L+ RG ++P Sbjct: 12 LEKYLSAGVRLGTRLSNRYLEERGFIFAVRPDGLRIFDIKKIDERLKIAAKFIARYP-PDRVLVHTTRPYGFKPVQMFCKFVGCRALTGRFIPGTLTNPNLPHYQEVDLLFVVDPKLDAQAVTEAAKMGIPVVALVDTDTPHQYIDLMVPCNNKGRKSLALIFWILARQILRERGELKP 189
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_CALMQ (30S ribosomal protein S2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps2p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.188e-31 Identity = 73/189 (38.62%), Postives = 109/189 (57.67%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTK--NCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 P Q + ++ +AA V LG + N Q ++F R DG+ I NL + E++++AAR+I P ++V S +PY + + F K+ + GR PGT TN T + LL++ DP+TD Q I EA+L P IA DTDS ++D+ IP NNKG++S+ +FWLLAR VL+ RG ++P Sbjct: 8 PEQGEEYLVPVERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMITRYP-PSRVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTDFQAINEASLTGIPVIALVDTDSDPTFIDLMIPCNNKGRNSLALVFWLLARQVLRERGELKP 195
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_PYRAE (30S ribosomal protein S2P OS=Pyrobaculum aerophilum GN=rps2p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.164e-31 Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMER--YVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 ++ L+A V LGT+ + +E ++F R DG+ I ++ K E+L++AA+ I A P ++V + RPYG + V F K+ A+ GR PGT TN + E LL + DP+ D Q + EAA P IA DTD+P +Y+D IP NNKG+ S+ +FW+LAR VL+ RG ++P Sbjct: 13 LEKYLSAGVRLGTRLSNKYLEDRGFIFAVRPDGLRIFDIKKIDERLKIAAKFI-ARYRPERVLVHTTRPYGFKPVQMFCKFVGCKALTGRFIPGTLTNPNLPHYQEVDLLFVVDPKLDAQAVAEAAKMGIPVIALVDTDTPHQYIDFMIPCNNKGRKSLALIFWILARQVLRERGELKP 190
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_METMA (30S ribosomal protein S2P OS=Methanosarcina mazei GN=rps2p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31 Identity = 70/194 (36.08%), Postives = 115/194 (59.28%), Query Frame = 1 Query: 73 IKMATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT 654 + +A A + ++ S I LAA VH+GT+ M R+V++ R DG+Y++++ T E++++A++++ + P I+V S+R YGQ F++ A+ GR PG+ TN F EP ++I+TDP D Q +KEA+ P IA CDT++ VD+ IP NNKG+ ++ ++WLLAR V ++ T Sbjct: 19 VPVADDEAASAKEGSTSLVSIDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHYD-PSRILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTDPAGDAQVLKEASSIGVPVIALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAREVSRLNNT 211 The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bpback to top |