DN135197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_META3 (30S ribosomal protein S2P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps2p PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29 Identity = 64/171 (37.43%), Postives = 102/171 (59.65%), Query Frame = 1 Query: 145 LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 LA+ +H+GT+ M+R++++ R DG+Y++++ KT E++ +AA+ + E P +I+ S R Y + KF + T AGR PGT TN F EP +L L+DPR D Q +KEA P + CDT+ ++D IP NNKG+ S+ +++L+AR ++ RG I Sbjct: 14 LASGIHIGTQQKTEDMKRFIYRVRADGLYVLDVRKTDERIGLAAKFLSKYE-PEEILAVSRRIYSVGPLKKFGQTTGITTAAGRFVPGTLTNPSSRKFLEPEVLFLSDPRIDRQALKEAIEIGIPIVGMCDTEHLTSFIDFIIPTNNKGRKSVSLVYYLIAREYMKNRGLI 183
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_NATPD (30S ribosomal protein S2P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps2p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.648e-29 Identity = 64/173 (36.99%), Postives = 103/173 (59.54%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 651 ++ LAA VH+GT+ M+R++ + R DG+Y++++ +T ++++ AA + + P I+V S+R YG+ KFA A A GR PGT TN + EP ++++TDP D Q +KEA P IA CD+++ VD+ +P NNKG+ ++ ++WLLA L RG Sbjct: 92 VEDYLAAGVHIGTQQKTKSMDRFIHRVRTDGLYVLDVSQTDQRIRTAASFLSNYQ-PEQILVASSRQYGRFPAEKFADAVGARARTGRFIPGTLTNPDYDGYIEPDVVVVTDPIGDSQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVIYWLLANETLDRRG 263
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_HALMA (30S ribosomal protein S2P OS=Haloarcula marismortui GN=rps2p PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 8.683e-29 Identity = 68/182 (37.36%), Postives = 104/182 (57.14%), Query Frame = 1 Query: 118 QKEAD----IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 651 Q EAD ++ L A VH+GT+ MER++ + R DG+Y++++ T E+++ AA + E P I+ S+R YG+ KFA+ A GR PGT TN + EP ++++TDP D Q +KEA P IA CD+++ VD+ +P NNKG+ ++ ++WLLA L RG Sbjct: 73 QSEADLLIPVEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLLANETLDRRG 253
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_AERPE (30S ribosomal protein S2P OS=Aeropyrum pernix GN=rps2p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28 Identity = 67/177 (37.85%), Postives = 101/177 (57.06%), Query Frame = 1 Query: 151 AEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDV 681 A V GT+ C M ++V + +G Y ++ K E+L MAA+ + E P I V S R YGQ+ V + AI GR PGTFTN + EP ++++TDPR D Q + EA+ P +A DTD+ + +D+ IPANN+G+ S+ ++W+L R +L+ RG ++P DV Sbjct: 18 AGVIYGTQICTRYMRQFVHRILPEGYYQLDYLKIDERLAMAAKFLSTFE-PEKIAVVSVRIYGQKPVRMMCERVGCKAITGRIIPGTFTNPNLEHYVEPDVVVVTDPRMDRQAVVEASKVGIPVVALVDTDNSIENIDLVIPANNRGRRSLALIYWILTREILRRRGVLKPDEDLDV 193
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_KORCO (30S ribosomal protein S2P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps2p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28 Identity = 67/176 (38.07%), Postives = 102/176 (57.95%), Query Frame = 1 Query: 136 QMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 Q L + VH+GT ME+++++ R DG+ II++ K E+++ A + + + P ++ SAR YG + V KFA+YT A I GR PGT TN EP +++L+DPR D Q E+ P +A D D+ + +D+ IP NNKG+ S+ ++WLL R VL+ R I P Sbjct: 24 QKYLLSGVHVGTGIRTKDMEKFIYRVRPDGLCIIDIRKIDERIRTAGKFLARFD-PDRVLAVSARIYGFKPVRKFAEYTGAMYITGRILPGTLTNPQAPLHLEPDVVLLSDPRVDRQIHIESVRMGIPVVALVDADNMLENIDLAIPVNNKGRRSLALVYWLLTREVLRNRKVIPP 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_ENCCU (40S ribosomal protein S0 OS=Encephalitozoon cuniculi GN=RPS0 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.351e-28 Identity = 65/173 (37.57%), Postives = 104/173 (60.12%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRR-NDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 648 +++++ ++ HLG + + RY++ R D I II++ TWEKL +AAR I++P I V S + +G++ V+KF + A I GR PG+FTN +PR+LI++D D Q I E+ N PTIAF +TD+ + VDI IP NN+ +I F++L+R++ M+ Sbjct: 19 VKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARAFCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIVSDTYADKQAILESQYCNLPTIAFVNTDNSLVGVDIAIPMNNRSPSAIAAGFFILSRLINYMK 191
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_NANEQ (30S ribosomal protein S2P OS=Nanoarchaeum equitans GN=rps2p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27 Identity = 61/175 (34.86%), Postives = 100/175 (57.14%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 I + + A +H+GT++ M+ YV K R DG+ I ++ K E+L++A++++ E P +I+V R + KF++ T A GR+ PGT TN + EP ++++TDP D + +A +A CDT+ Y+D IPANN+G S+ ++W+LAR L+ RG I Sbjct: 7 INVYVKAGIHIGTRHLTKDMKPYVSKIREDGLAIFDIRKIDERLRLASKMLSYYE-PNEILVVGRRETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITDPIMDKNALHDAYESGITILALCDTNHTKNYIDFCIPANNRGSKSLALIYWILAREYLRNRGVI 180
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_NITMS (30S ribosomal protein S2P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps2p PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 56/175 (32.00%), Postives = 101/175 (57.71%), Query Frame = 1 Query: 142 MLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVI--VAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR 660 +L+ + +GT+ M ++ K +G+Y+++L T +K++ AA+ I + +EN +IV S R Y + + KF + + + GR PGT TN + EP+L++++DP+ D Q I EA P I +TD+ +D+ IPANN+G+ ++ ++WLL R +L +G ++ Sbjct: 14 ILSTGIRVGTQVKTKFMRPFITKASPEGLYMLDLDITLDKIKTAAKFINRLGVEN---LIVCSGRQYAETPIEKFCETLGSKKLLGRFMPGTLTNPSLPYYIEPKLVLISDPQVDEQAITEATNAGIPVIGIANTDNITSNLDVIIPANNRGRKALATVYWLLVRQILIEKGELK 185
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_CENSY (30S ribosomal protein S2P OS=Cenarchaeum symbiosum GN=rps2p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19 Identity = 55/175 (31.43%), Postives = 96/175 (54.86%), Query Frame = 1 Query: 139 MMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPG--DIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 ++ + + +GT+ M++++ G Y ++L T +++ AA+ I E+ G ++IV S + + + KFA+ I R PGT TN + EP+LL++ DP+ D Q + EA P I ++D+ +D+ IPANN+G+ ++ +FWLLAR VL +RG + Sbjct: 15 LITTSGISIGTQVKTKFMKQFISDTDPTGTYTLDLEATQGRIKAAAQFI---EHTGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDPQVDAQAVTEATNAGIPVIGIANSDNVTSRLDVIIPANNRGRGALAAIFWLLAREVLVIRGEV 186 The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bpback to top |