DN135197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_BOVIN (40S ribosomal protein SA OS=Bos taurus GN=RPSA PE=2 SV=4) HSP 1 Score: 259.996 bits (663), Expect = 8.583e-69 Identity = 125/191 (65.45%), Postives = 149/191 (78.01%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_XENTR (40S ribosomal protein SA OS=Xenopus tropicalis GN=rpsa PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.464e-68 Identity = 124/191 (64.92%), Postives = 149/191 (78.01%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA + A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_ICTPU (40S ribosomal protein SA OS=Ictalurus punctatus GN=rpsa PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.464e-68 Identity = 126/191 (65.97%), Postives = 147/191 (76.96%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 L KE D+ LAA HLG N DFQME+YV+KR++DGIYIINL KTWEKL +AAR IVAIENP D+ V S+R GQRA LKFA T A AGR TPGTFTNQ+Q +F EPRLLI+TDPR DHQP+ EA+ N PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYVYKRKSDGIYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRACLKFASGTGATTFAGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAREVLRMRGTISREHPWEVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_TRIAD (40S ribosomal protein SA OS=Trichoplax adhaerens GN=TRIADDRAFT_49917 PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.912e-68 Identity = 121/185 (65.41%), Postives = 149/185 (80.54%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 D+ MLAA HLGT N D+QME+YVF+RR DG++II+L +TWEKL +AAR+I +IENP D+ V SARPYGQRAVLKFAK+T A IAGR TPGTFTNQ+Q ++ EPRLLI+TDPR DHQPI EA+ N P IAFC+TDS +RY+D+GIP NNKG H+IG ++WLLAR VL++RGTI W+ M Sbjct: 14 DVSKMLAASAHLGTTNVDYQMEQYVFRRRTDGVHIIDLRQTWEKLLIAARIIASIENPADVCVLSARPYGQRAVLKFAKFTGASPIAGRFTPGTFTNQIQKAYREPRLLIVTDPRVDHQPITEASYVNIPVIAFCNTDSRLRYIDVGIPCNNKGAHAIGLMWWLLAREVLRLRGTISRDTDWEHM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_DROPS (40S ribosomal protein SA OS=Drosophila pseudoobscura pseudoobscura GN=sta PE=3 SV=2) HSP 1 Score: 258.84 bits (660), Expect = 1.912e-68 Identity = 127/192 (66.15%), Postives = 150/192 (78.12%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ N P IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+V Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRTVEWPVVV 199
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_DROPE (40S ribosomal protein SA OS=Drosophila persimilis GN=sta PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.912e-68 Identity = 127/192 (66.15%), Postives = 150/192 (78.12%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ N P IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+V Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRTVEWPVVV 199
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_DROAN (40S ribosomal protein SA OS=Drosophila ananassae GN=sta PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.912e-68 Identity = 126/192 (65.62%), Postives = 150/192 (78.12%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAI+N D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ N P IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+V Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIDNASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVV 199
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_LACBS (40S ribosomal protein S0 OS=Laccaria bicolor (strain S238N-H82) GN=RPS0 PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.497e-68 Identity = 124/196 (63.27%), Postives = 155/196 (79.08%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMV 687 P L+ E +IQ++LAA+ H+GTKNCD QME YV+KRR DGI+I+N+GKTWEKL +AARVI A+ENP D+ V SARPYG RAVLK+A T A AIAGR TPG+FTN + SF EPRL+I+TDPR DHQ I+EA+ N P IA CDTD+P+++VD+ IP NNK +HSIG ++WLLAR VL++RGTI R W+VMV Sbjct: 6 PSVLAATEEEIQLLLAAQCHIGTKNCDKQMEPYVWKRRADGIHILNIGKTWEKLVLAARVIAAVENPNDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRVDHQAIREASYVNIPVIALCDTDAPLKFVDVAIPTNNKTRHSIGLIWWLLAREVLRLRGTIPRTSDGWNVMV 201
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_SOLSE (40S ribosomal protein SA OS=Solea senegalensis GN=rpsa PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.261e-68 Identity = 124/191 (64.92%), Postives = 146/191 (76.44%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 L KE D+ LAA HLG N DFQM+ YV+KR++DG+YIINL KTWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A GR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H WDVM Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMDHYVYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQIQAAFREPRLLLVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWDVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_DROVI (40S ribosomal protein SA OS=Drosophila virilis GN=sta PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.261e-68 Identity = 127/192 (66.15%), Postives = 149/192 (77.60%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 LS KE DI ML A HLG++N +FQME+YVFKRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ N P IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+V Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRTTEWPVVV 199 The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bpback to top |