DN135197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_DROMO (40S ribosomal protein SA OS=Drosophila mojavensis GN=sta PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.261e-68 Identity = 127/192 (66.15%), Postives = 149/192 (77.60%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 LS KE DI ML A HLG++N +FQME+YVFKRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ N P IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+V Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRTTEWPVVV 199
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_DROGR (40S ribosomal protein SA OS=Drosophila grimshawi GN=sta PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.261e-68 Identity = 127/192 (66.15%), Postives = 149/192 (77.60%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 LS KE DI ML A HLG++N +FQME+YVFKRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ N P IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+V Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRTTEWPVVV 199
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_SPAAU (40S ribosomal protein SA OS=Sparus aurata GN=rpsa PE=2 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 4.260e-68 Identity = 124/191 (64.92%), Postives = 147/191 (76.96%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 L KE D+ LAA HLG N DFQM++YV+KR++DG+YIINL KTWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A GR TPGTFTNQ+Q +F EPRLLI+TDPR DHQP+ EA+ N PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMDQYVYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWEVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_CRIGR (40S ribosomal protein SA OS=Cricetulus griseus GN=Rpsa PE=1 SV=3) HSP 1 Score: 257.684 bits (657), Expect = 4.260e-68 Identity = 124/191 (64.92%), Postives = 148/191 (77.49%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR V +MRGTI H W+VM Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVRRMRGTISREHPWEVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_DROWI (40S ribosomal protein SA OS=Drosophila willistoni GN=sta PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 7.266e-68 Identity = 126/192 (65.62%), Postives = 149/192 (77.60%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ N P IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+V Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRSIEWPVVV 199
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_SALSA (40S ribosomal protein SA OS=Salmo salar GN=rpsa PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.619e-67 Identity = 123/191 (64.40%), Postives = 145/191 (75.92%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 L KE D+ LAA HLG N DFQME Y +KR++DG+YIINL KTWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A GR TPGTFTNQ+Q +F EPRLLI+TDPR DHQP+ EA+ N PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+L+R VL+MRGTI H W+VM Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNMDFQMEHYTYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIAMCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLSREVLRMRGTISREHPWEVM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_POSPM (40S ribosomal protein S0 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS0 PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.114e-67 Identity = 122/196 (62.24%), Postives = 154/196 (78.57%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMV 687 P LS + +IQ++LAA+ H+G+KNCD QM YV+KRR DGI+I+N+GKTWEKL AAR+I AIENP D+ V SARPYG RAVLK+A T A AIAGR TPG+FTN + SF EPRL+++TDPR DHQ I+EA+ N P IAFCDTD+P+++VD+ IP NNK +HSIG ++WLLAR VL++RGTI R W+VMV Sbjct: 6 PSVLSATDEEIQLLLAAQAHIGSKNCDKQMLPYVWKRRADGIHILNIGKTWEKLVFAARIIAAIENPNDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRVDHQAIREASYVNIPVIAFCDTDAPLKFVDVAIPTNNKSRHSIGLMWWLLAREVLRLRGTIPRTTDGWNVMV 201
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_TRIGR (40S ribosomal protein SA OS=Tripneustes gratilla PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 8.033e-67 Identity = 118/191 (61.78%), Postives = 150/191 (78.53%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 L+ KE D+Q LA+ H+G+ N D+QM +YV+KR+ DG YIINL +TWEKL MAAR+IVAIENP D+ V S+RPYGQRAVLKF +T A IAGR+TPGTFTNQ+Q +F EPR+LI+TDPR+DHQP+ EA+ N P IA C+TDSP+RYVDI IP NNK HSIG ++W+L+R VL++RG I W++M Sbjct: 8 LALKEDDVQKFLASGAHIGSSNLDYQMTQYVYKRKPDGTYIINLRRTWEKLLMAARIIVAIENPADVCVISSRPYGQRAVLKFGAHTGATPIAGRYTPGTFTNQIQAAFREPRILIVTDPRSDHQPVTEASYVNIPVIALCNTDSPLRYVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAISRDVTWEIM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_CRYNE (40S ribosomal protein S0 OS=Cryptococcus neoformans GN=RPS0 PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.337e-66 Identity = 121/198 (61.11%), Postives = 151/198 (76.26%), Query Frame = 1 Query: 103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG----HKWDVM 684 P+ L E DIQ++LAA+ HLGTKNCD ME YV+KRR DGI++IN+GKTWEKL +AARV+ IENP D+ V SARPYG RAVLK+ +T A AIAGR TPG+FTN + SF EPR++I+TDPR DHQ I+EAA N P IAFCDTD+ ++VDI IPANNK +HSIG +++LL R VL++RGT+ G WDV+ Sbjct: 7 PKALQATEDDIQLLLAAQCHLGTKNCDKSMENYVWKRRADGIHVINVGKTWEKLVLAARVLATIENPNDVCVISARPYGHRAVLKYGSFTGAQAIAGRFTPGSFTNYITRSFKEPRVIIVTDPRVDHQAIREAAYVNIPVIAFCDTDASTKFVDIAIPANNKSRHSIGLMWYLLCREVLRLRGTVPRGPTGPSGWDVL 204
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_URECA (40S ribosomal protein SA OS=Urechis caupo PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.053e-66 Identity = 123/192 (64.06%), Postives = 146/192 (76.04%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 L+ KE D+ LA HLG N DFQME+YV+KRR DG IIN+ KTWEK+ +AAR I AIENP DI V SARPYGQRAVLKFA YT A IAGR TPGTFTNQ+QT+F EPRLL++TDP TDHQP+ EA+ N P IA +TDSP++YVDI IP NNK HS+G ++W+LAR VL++RGTI W+VMV Sbjct: 8 LALKEEDVTKFLACASHLGANNVDFQMEQYVYKRRPDGTSIINVRKTWEKVLLAARAIAAIENPADICVISARPYGQRAVLKFAHYTGATPIAGRFTPGTFTNQIQTAFREPRLLVVTDPYTDHQPVTEASYVNIPVIALTNTDSPLKYVDIAIPCNNKSIHSVGLMWWMLAREVLRLRGTISREVPWEVMV 199 The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bpback to top |