DN135189

Overview
NameDN135189
Unique NameDN135189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10427 contig Csv1_Contig10427:67..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.960e-30
Identity = 73/150 (48.67%), Postives = 91/150 (60.67%), Query Frame = 3
Query:  189 NGGLYRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLG--ESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            N  L RI LKK +      +  +L      +       +SL+ NL    S       LKNY+DAQY+GEIG+GTPPQ FTV+FDTGSSNLWVPS  C    IAC  H KY SG+SSTY KNG +  I YG+G++SG+ S+D   IGDL +
Sbjct:   16 NDALVRIPLKKFR-----SIRRQLTDSGKRAEELLADHHSLKYNLSFPASNAPTPETLKNYLDAQYYGEIGLGTPPQPFTVVFDTGSSNLWVPSIHCSLLDIACLLHHKYNSGKSSTYVKNGTAFAIQYGSGSLSGYLSQDTCTIGDLAI 160          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.125e-29
Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 3
Query:  288 TSIRKYSLRGNLGESGDADI-----VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            T +R  S    + ++ DA +     V + N+M+AQYF EI IGTPPQ F V+ DTGSSNLWVPSS+C  SIACY H+KY S  SSTYKKNG S  I YG+G++SGF S+D + IGD+ +
Sbjct:   50 TGLRTESHTQAMFKATDAQVSGNHPVPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQCG-SIACYLHNKYESSESSTYKKNGTSFKIEYGSGSLSGFVSQDRMTIGDITI 167          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CATD_BOVIN (Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.469e-29
Identity = 59/88 (67.05%), Postives = 71/88 (80.68%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKI 614
            LKNYMDAQY+GEIGIGTPPQ FTV+FDTGS+NLWVPS  C    IAC+ H KY S +SSTY KNG + DIHYG+G++SG+ S+D V +
Sbjct:   51 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWTHRKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSV 138          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.275e-29
Identity = 63/108 (58.33%), Postives = 77/108 (71.30%), Query Frame = 3
Query:  294 IRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKI 614
            I KY+ R      G    + L NYMDAQY+GEIGIGTPPQ FTV+FDTGS+NLWVPS  C    IAC+ H KY S +SSTY KNG + DIHYG+G++SG+ S+D V +
Sbjct:   27 ISKYATREPAVRQGPIPEL-LTNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSV 133          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.523e-29
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFS-IACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            LKNYMDAQY+GEIG+GTP Q FTV+FDTGSSNLW+PS  C F+ IAC  H KY   +SSTY KNG    I YG+G++SG+ S+D   IGD+VV
Sbjct:   68 LKNYMDAQYYGEIGLGTPVQMFTVVFDTGSSNLWLPSIHCSFTDIACLLHHKYNGAKSSTYVKNGTEFAIQYGSGSLSGYLSQDSCTIGDIVV 160          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.244e-28
Identity = 60/89 (67.42%), Postives = 71/89 (79.78%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFF-SEDHVKI 614
            LKNYMDAQY+GEIGIGTPPQ FTV+FDTGSSNLWVPS  C    IAC+ H KY SG+SSTY KNG +  IHYG+G++SG+  S+D V +
Sbjct:    7 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTTFAIHYGSGSLSGYLSSQDTVSV 95          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: NAPSA_MOUSE (Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.345e-27
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 3
Query:  333 GDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDL 623
            G+   V L  +M+ QYFG IG+GTPPQNFTV+FDTGSSNLWVPS++C +FS+AC+FH ++    SS+++ NG    I YGTG +SG  S+D++ IG +
Sbjct:   58 GNPSFVPLSKFMNTQYFGTIGLGTPPQNFTVVFDTGSSNLWVPSTRCHFFSLACWFHHRFNPKASSSFRPNGTKFAIQYGTGRLSGILSQDNLTIGGI 155          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.164e-26
Identity = 55/95 (57.89%), Postives = 69/95 (72.63%), Query Frame = 3
Query:  348 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            V L NY+++QY+GEIGIGTPPQ F VIFDTGS+NLWVPS+KC    +AC  HS Y S  SS+Y +NG    IHYG+G + GF S+D V +G + V
Sbjct:   73 VVLTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLSQDSVTVGGITV 167          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.164e-26
Identity = 55/95 (57.89%), Postives = 68/95 (71.58%), Query Frame = 3
Query:  348 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            V L NY++ QY+GEIGIGTPPQ F VIFDTGS+NLWVPS+KC    +AC  HS Y S  SS+Y +NG    IHYG+G + GF S+D V +G + V
Sbjct:   74 VVLTNYLNTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTIHYGSGRVKGFLSQDSVTVGGITV 168          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 3
Query:  198 LYRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            L ++ L ++ +  N     R   ++    R ++ +  L  N         V + N+++AQYF EI +GTPPQ F V+ DTGSSNLWVP S C  SIAC+ H+KY S  SSTYK NG    I YG+G +SGF S+D ++IGDL V
Sbjct:   25 LNKVPLDEQLYTHNIDAHVRALGQKYMGIRPNVHQELLEENSLNDMSRHDVLVDNFLNAQYFSEISLGTPPQKFKVVLDTGSSNLWVPGSDC-SSIACFLHNKYDSSASSTYKANGTEFAIKYGSGELSGFVSQDTLQIGDLKV 167          
The following BLAST results are available for this feature:
BLAST of DN135189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
CATD_CHIHA2.960e-3048.67Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
CARP_NEUCR1.125e-2954.62Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
CATD_BOVIN1.469e-2967.05Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2[more]
CATD_SHEEP4.275e-2958.33Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 ... [more]
CATD_CLUHA9.523e-2963.44Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]
CATD_PIG1.244e-2867.42Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]
NAPSA_MOUSE2.345e-2754.08Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1[more]
RENI2_MOUSE1.164e-2657.89Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
RENI1_MOUSE1.164e-2657.89Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]
CARP_ASPFU1.986e-2643.75Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionwca07e11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07e11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135189 ID=DN135189; Name=DN135189; organism=Citrus sinensis; type=EST; length=630bp
GGGGATAGAGAATTTNNNNNTTCTATTTAAAATATCTAACATCCTTTCGA
TTATCTCTGCTCACAAGCATTTCTCTGTATCGATCATCGAAAGAGACTTT
ACTTGTCAACATGGGAACGGTATTCAAATCTATTACAGCCGGTTTCTTCC
TTTGTTTGCTTCTGTTTCCTGTGGTGTTCTCGACACCAAACGGTGGGTTA
TACAGAATCGGACTTAAAAAGAGGAAGTTTGACCTGAACAACAGAGTGGC
TGCCCGCCTTGACTCCAAGGAAGGAGAGTCATTCAGAACTTCTATCAGAA
AATATTCTCTTCGTGGAAACTTAGGAGAGTCAGGGGATGCTGATATTGTT
GCGCTGAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGTATTGG
CACACCCCCGCAAAATTTCACTGTGATATTTGACACTGGTAGTTCAAATT
TGTGGGTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTATTTCCAT
TCCAAGTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGGTAAATC
GGCTGATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAGTGAAG
ACCATGTCAAAATCGGTGATCTTGTGGTCA
back to top