DN135189

Overview
NameDN135189
Unique NameDN135189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10427 contig Csv1_Contig10427:67..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPC_RHIFE (Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 3
Query:  363 YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            YMDA YFGEI IGTPPQNF V+FDTGSSNLWVPS  C  + AC  H+++   +SSTY  NG++  + YG+G+++GFF  D + +  + V
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-TQACTGHTRFNPSQSSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQV 155          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 60/149 (40.27%), Postives = 86/149 (57.72%), Query Frame = 3
Query:  198 LYRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSL----RGNLGESGDADIV-ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            L R+ LKK K       + R   KE    +  ++ +      + + G+ GD  ++     YMDA Y+GEI IGTPPQNF V+FDTGSSNLWV S  C  S AC  H++Y   +SSTY   G++  + YGTG+++GFF  D +++  + V
Sbjct:   18 LIRVPLKKMK-------SIRETMKEQGVLKDFLKNHKYDPGQKYHFGKFGDYSVLYEPMAYMDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHTRYNPSKSSTYYTQGQTFSLQYGTGSLTGFFGYDTLRVQSIQV 158          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.875e-22
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDL 623
            L+NYMD +YFG IGIGTPPQ FTVIFDTGSSNLWVPS  C  S AC  H+++   +SSTY+   +   + YGTG+++G    D V++G +
Sbjct:   66 LENYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQQSSTYQGTNQKLSVAYGTGSMTGILGYDTVQVGGI 154          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.633e-22
Identity = 51/92 (55.43%), Postives = 61/92 (66.30%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            L NY+D +YFG I IG+PPQNFTVIFDTGSSNLWVPS  C  S AC  H  +    SSTY++ G S  I YGTG+++G    D V +  L V
Sbjct:   66 LINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-TSPACQTHPVFHPSLSSTYREVGNSFSIQYGTGSLTGIIGADQVSVEGLTV 156          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21
Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = 3
Query:  297 RKYSLRGNLGESGDADIV-ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            RK+  R  L ++GD  ++    +YMDA YFG+I +GTPPQ+F V+FDTGSSNLWVPS  C  S+AC  H+++    SSTY    +S  + YGTG+++G F  D + I D+ V
Sbjct:   52 RKF-FRNRLAKTGDFSVLYEPMSYMDAAYFGQISLGTPPQSFQVLFDTGSSNLWVPSVYC-SSLACTTHTRFNPRDSSTYVATDQSFSLEYGTGSLTGVFGYDTMTIQDIQV 161          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21
Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDL 623
            L+NY+D +YFG IGIGTP Q+FTV+FDTGSSNLWVPS  C  S+AC  H+++    SSTY+   ++  I YGTG+++G    D V++G +
Sbjct:   68 LENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYC-SSLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGI 156          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21
Identity = 60/147 (40.82%), Postives = 83/147 (56.46%), Query Frame = 3
Query:  192 GGLYRIGLKKRKFDLNNRVAARLDSKE-GESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            G L+R+ L++ +  L  ++ A+    E   S    + + S   N+  S +  ++   NY+D +YFG I IGTPPQNFTVIFDTGSSNLWVPS  C  S AC  H  +   +S TY + G    I YGTG+++G    D V +  L V
Sbjct:   20 GALHRVPLRRHQ-SLRKKLRAQGQLSEFWRSHNLDMTRLSESCNVYSSVNEPLI---NYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYC-TSPACKAHPVFHPSQSDTYTEVGNHFSIQYGTGSLTGIIGADQVSVEGLTV 161          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 48/89 (53.93%), Postives = 62/89 (69.66%), Query Frame = 3
Query:  363 YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            YMDA YFGEI IGTPPQNF V+FDTGSSNLWV S  C  S AC  H+++   +SSTY   G++  + YGTG+++GFF  D + +  + V
Sbjct:   71 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQV 158          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 58/135 (42.96%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  294 IRKYSLRGNLGESGDA-------------------------DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDL 623
            +RK SLR NL E G                           D   L+NY+D +YFG IGIGTP Q+FTVIFDTGSSNLWVPS  C  S+AC  H+++    SSTY+    +  I YGTG+++G    D V++G +
Sbjct:   23 VRKKSLRRNLSEHGLLKDFLKKHNFNPASKYFPQAEAPTLIDEQPLENYLDMEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACTNHNRFNPQDSSTYQSTSGTVSITYGTGSMTGILGYDTVQVGGI 156          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.923e-21
Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLV 626
            L NY+D QYFG+I IGTPPQ FTV+FDTGSS+LWVPS  C  S+AC  H ++   +SST++   KS  I YGTG++ G    D V +  +V
Sbjct:   66 LTNYLDCQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSVYCN-SVACQNHHRFDPSKSSTFQNMDKSLSIQYGTGSMQGLLGYDTVTVSSIV 155          
The following BLAST results are available for this feature:
BLAST of DN135189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
PEPC_RHIFE2.967e-2253.93Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=... [more]
PEPC_MOUSE2.967e-2240.27Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
PEPA_RHIFE3.875e-2254.44Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
CATE_CAVPO8.633e-2255.43Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
PEPC_CAVPO1.127e-2147.32Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]
PEPA_HUMAN1.127e-2152.22Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
CATE_MOUSE1.127e-2140.82Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]
PEPC_RAT1.473e-2153.93Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
PEPA2_MACFU1.473e-2142.96Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
CHYM_CALJA1.923e-2152.75Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionwca07e11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07e11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135189 ID=DN135189; Name=DN135189; organism=Citrus sinensis; type=EST; length=630bp
GGGGATAGAGAATTTNNNNNTTCTATTTAAAATATCTAACATCCTTTCGA
TTATCTCTGCTCACAAGCATTTCTCTGTATCGATCATCGAAAGAGACTTT
ACTTGTCAACATGGGAACGGTATTCAAATCTATTACAGCCGGTTTCTTCC
TTTGTTTGCTTCTGTTTCCTGTGGTGTTCTCGACACCAAACGGTGGGTTA
TACAGAATCGGACTTAAAAAGAGGAAGTTTGACCTGAACAACAGAGTGGC
TGCCCGCCTTGACTCCAAGGAAGGAGAGTCATTCAGAACTTCTATCAGAA
AATATTCTCTTCGTGGAAACTTAGGAGAGTCAGGGGATGCTGATATTGTT
GCGCTGAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGTATTGG
CACACCCCCGCAAAATTTCACTGTGATATTTGACACTGGTAGTTCAAATT
TGTGGGTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTATTTCCAT
TCCAAGTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGGTAAATC
GGCTGATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAGTGAAG
ACCATGTCAAAATCGGTGATCTTGTGGTCA
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