DN135173

Overview
NameDN135173
Unique NameDN135173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2079 contig Csv1_Contig2079:301..963. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: QOR_LEIAM (Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.207e-18
Identity = 56/170 (32.94%), Postives = 86/170 (50.59%), Query Frame = 1
Query:  160 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAK-LAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYN------LEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFL 648
            +L +  +TA   L EV   KKG+   V+AA+G  GQ+  Q  K + GC V+G+  S+EK + LK+  G D   NYK E  LD  L    P+G+D+ +E VGG   +  + ++ +  R+ + G IS Y          P G      L+ K   L GF    ++ + PK++
Sbjct:  125 VLPVSALTAAVALGEVGRVKKGDVALVTAAAGGTGQIAVQLLKHVYGCTVIGTCSSEEKAEFLKS-IGCDHVINYKTE-SLDGRLHELCPKGVDVVYECVGGHTFNDAVRHVAVHARVVIIGSISSYKSGEVVPFSDPSGTSVTMLLLVKSASLNGFFLPQFHDVIPKYM 292          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: YMN1_YEAST (Uncharacterized membrane protein YML131W OS=Saccharomyces cerevisiae GN=YML131W PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11
Identity = 58/227 (25.55%), Postives = 102/227 (44.93%), Query Frame = 1
Query:    4 GVAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDV-PLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY-----VSAASGAVGQLVGQFAK--LAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQG-IDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLE 651
            G+ K   S +  ++  D V   TGW  +++++   +  L K+    V  L +Y  +LG   +TAY   +     ++ E  Y     +S A+GAVG +  Q A        V+  AG  EKV  +++        +YK        ++    +  +D + +NVG  +L+A +L ++ R  +  CG IS YN            ++ KR+ ++G L  D    +PK L+
Sbjct:   85 GIGKVLASRNKAFSPGDYVSAVTGWTTHAIISQENVQGLRKLDKNKVGKLWWYLSVLGGTSLTAYFIFFTYAQLQEREEDYGKVYLISGAAGAVGTVCIQLALNVFKASKVIAIAGGPEKVAFVESFGDNVVGVDYKDPSFKQKLIEAAGGENTVDYFIDNVGSNVLEAGVLLLKQRAMLIACGAISAYNDPSKFVFKGYSFILTKRLVVKGVLVTDNIDDFPKALD 311          
The following BLAST results are available for this feature:
BLAST of DN135173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
QOR_LEIAM2.207e-1832.94Probable quinone oxidoreductase OS=Leishmania amaz... [more]
YMN1_YEAST3.412e-1125.55Uncharacterized membrane protein YML131W OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionwca07c11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07c11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135173 ID=DN135173; Name=DN135173; organism=Citrus sinensis; type=EST; length=663bp
GGGGGGGTAGCTAAAGNNNNGGATTCTACACATCCAAATTATGCAAAAGA
TGACTTGGTTTGGGGCTCCACCGGGTGGGAGGAGTACAGTCTCGTTACAG
CCCCACAGCTTTTGATTAAAATTCAGCATACAGATGTGCCCCTTTCATAC
TATACTGGAATCCTTGGTATGCCTGGTGTGACTGCATACGCTGGTTTATA
CGAAGTTTGCTCTCCGAAGAAAGGTGAGTACGTCTATGTATCTGCAGCAT
CTGGAGCTGTTGGTCAGCTTGTTGGCCAATTTGCAAAATTGGCTGGTTGC
TATGTTGTTGGAAGTGCTGGAAGCAAAGAAAAGGTCGATTTGTTGAAGAA
CAAGTTTGGATTTGATGATGCTTTTAACTACAAGCAAGAGCCAGACTTGG
ATGCAGCACTCAAAAGATGCTTCCCTCAAGGAATCGACATATATTTCGAA
AACGTTGGGGGAAAGATGCTGGACGCAGTGCTACTCAACATGAGGCTCCG
GGGCCGCATTGCGGTATGCGGTATGATCTCGCAGTACAACCTGGAAAAAC
CTGAAGGCGTACACAACTTAGAGCAACTGATCGGGAAACGGATTCGCCTG
GAAGGATTTCTAGCTGGTGATTACTATCACCTCTATCCGAAATTCTTGGA
ACTGGTCATTCCT
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