DN135157

Overview
NameDN135157
Unique NameDN135157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length546
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13665 contig Csv1_Contig13665:1..527. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFO (ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate NF54) GN=ARF1 PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 1.499e-63
Identity = 114/147 (77.55%), Postives = 137/147 (93.20%), Query Frame = 3
Query:  105 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGLHS 545
            MGL  ++LF+RLF KK++RILMVGLDAAGKTTILYK+KLGE+VTTIPTIGFNVETVE++NISFTVWDVGGQDKIRPLWRHY+ NT GLIFVVDSNDR+RI +AR+ LHRM+NE+EL+DA++LVFANKQDLPNAM+AAE+T+   L++
Sbjct:    1 MGLYVSRLFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTIPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREGLHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNT 147          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARF2_YEAST (ADP-ribosylation factor 2 OS=Saccharomyces cerevisiae GN=ARF2 PE=1 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 3.340e-63
Identity = 116/147 (78.91%), Postives = 132/147 (89.80%), Query Frame = 3
Query:  105 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGLHS 545
            MGL  +KLFS LF  KEMRILMVGLD AGKTT+LYKLKLGE++TTIPTIGFNVETV+YKNISFTVWDVGGQD+IR LWRHY++NT+G+IFV+DSNDR RI EAR+ + RMLNEDELR+AV LVFANKQDLP AM+AAEIT+  GLHS
Sbjct:    1 MGLYASKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVIDSNDRSRIGEAREVMQRMLNEDELRNAVWLVFANKQDLPEAMSAAEITEKLGLHS 147          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARF1_YEAST (ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae GN=ARF1 PE=1 SV=3)

HSP 1 Score: 239.58 bits (610), Expect = 7.440e-63
Identity = 116/147 (78.91%), Postives = 131/147 (89.12%), Query Frame = 3
Query:  105 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGLHS 545
            MGL  +KLFS LF  KEMRILMVGLD AGKTT+LYKLKLGE++TTIPTIGFNVETV+YKNISFTVWDVGGQD+IR LWRHY++NT+G+IFVVDSNDR RI EAR+ + RMLNEDELR+A  LVFANKQDLP AM+AAEIT+  GLHS
Sbjct:    1 MGLFASKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHS 147          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARF_GIALA (ADP-ribosylation factor OS=Giardia lamblia PE=3 SV=3)

HSP 1 Score: 219.55 bits (558), Expect = 7.967e-57
Identity = 106/147 (72.11%), Postives = 126/147 (85.71%), Query Frame = 3
Query:  105 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRD--RIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGL 539
            MG   +K+F +LF+KKE+RILMVGLDAAGKTTILYKL LGE+VTT+PTIGFNVETVEYKNI+FTVWDVGGQD IRPLWRHY+QNT  LI+V+DS D +  RI +A++ELH +L EDELRDA LLVFANKQDLP AM+  ++T+  GL
Sbjct:    1 MGQGASKIFGKLFSKKEVRILMVGLDAAGKTTILYKLMLGEVVTTVPTIGFNVETVEYKNINFTVWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNELHTLLGEDELRDAALLVFANKQDLPKAMSTTDLTERLGL 147          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARF6_XENLA (ADP-ribosylation factor 6 OS=Xenopus laevis GN=arf6 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 3.027e-56
Identity = 103/139 (74.10%), Postives = 119/139 (85.61%), Query Frame = 3
Query:  123 KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGL 539
            K+FS++F  KEMRILM GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+  TQGLIFVVD  DRDRI EAR ELHR++N+ E+RDA++L+FANKQDLP+AM   EI +  GL
Sbjct:    3 KMFSKIFGNKEMRILMRGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCPDRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGL 141          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 3.954e-56
Identity = 103/139 (74.10%), Postives = 119/139 (85.61%), Query Frame = 3
Query:  123 KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGL 539
            KL S++F  KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+  TQGLIFVVD  DRDRI EAR ELHR++N+ E+RDA++L+FANKQDLP+AM   EI +  GL
Sbjct:    3 KLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGL 141          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 6.745e-56
Identity = 102/139 (73.38%), Postives = 119/139 (85.61%), Query Frame = 3
Query:  123 KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGL 539
            K+ S++F  KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+  TQGLIFVVD  DRDRI EAR ELHR++N+ E+RDA++L+FANKQDLP+AM   EI +  GL
Sbjct:    3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGL 141          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 6.745e-56
Identity = 102/139 (73.38%), Postives = 119/139 (85.61%), Query Frame = 3
Query:  123 KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGL 539
            K+ S++F  KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+  TQGLIFVVD  DRDRI EAR ELHR++N+ E+RDA++L+FANKQDLP+AM   EI +  GL
Sbjct:    3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGL 141          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 6.745e-56
Identity = 102/139 (73.38%), Postives = 119/139 (85.61%), Query Frame = 3
Query:  123 KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGL 539
            K+ S++F  KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+  TQGLIFVVD  DRDRI EAR ELHR++N+ E+RDA++L+FANKQDLP+AM   EI +  GL
Sbjct:    3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGL 141          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 6.745e-56
Identity = 102/139 (73.38%), Postives = 119/139 (85.61%), Query Frame = 3
Query:  123 KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGL 539
            K+ S++F  KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+  TQGLIFVVD  DRDRI EAR ELHR++N+ E+RDA++L+FANKQDLP+AM   EI +  GL
Sbjct:    3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGL 141          
The following BLAST results are available for this feature:
BLAST of DN135157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF1_PLAFO1.499e-6377.55ADP-ribosylation factor 1 OS=Plasmodium falciparum... [more]
ARF2_YEAST3.340e-6378.91ADP-ribosylation factor 2 OS=Saccharomyces cerevis... [more]
ARF1_YEAST7.440e-6378.91ADP-ribosylation factor 1 OS=Saccharomyces cerevis... [more]
ARF_GIALA7.967e-5772.11ADP-ribosylation factor OS=Giardia lamblia PE=3 SV... [more]
ARF6_XENLA3.027e-5674.10ADP-ribosylation factor 6 OS=Xenopus laevis GN=arf... [more]
ARF3_DROME3.954e-5674.10ADP-ribosylation factor 3 OS=Drosophila melanogast... [more]
ARF6_RAT6.745e-5673.38ADP-ribosylation factor 6 OS=Rattus norvegicus GN=... [more]
ARF6_PIG6.745e-5673.38ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE... [more]
ARF6_MOUSE6.745e-5673.38ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 ... [more]
ARF6_HUMAN6.745e-5673.38ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 ... [more]

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Properties
Property NameValue
Genbank descriptionwca07a08 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07a08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135157 ID=DN135157; Name=DN135157; organism=Citrus sinensis; type=EST; length=546bp
GGGGATAACATATTTCNNNNTTGTTGTTAAGCTAATAAGCNNNGTCCTCC
ACCCCCCCCCTCCGCTCTCTCTCGCGTTCTCTGAAGTGATCCCCAGCCGG
AAGAATGGGGCTGACTTTCACAAAGCTGTTCAGCCGGCTCTTTGCCAAGA
AAGAGATGCGAATTCTAATGGTTGGTCTTGATGCTGCTGGTAAGACCACT
ATCTTGTACAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCCTACCAT
TGGGTTTAATGTGGAGACCGTTGAATATAAGAACATCAGTTTCACTGTGT
GGGATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTATTTC
CAGAACACTCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAGAGACCG
TATTGTAGAAGCAAGGGATGAATTGCATAGGATGTTGAATGAGGATGAGC
TGCGAGATGCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTTCCAAAT
GCAATGAATGCTGCTGAGATTACTGATANNNNNGGCCTCCACTCCC
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