DN135151

Overview
NameDN135151
Unique NameDN135151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 2
Query:   95 IGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 502
            I ING GRIGR+V R+ L   ++ + A I+     + + ++  YD+ HG +   + KV+  +  +      + +   RNPE +PW E   + V+E+TG F                V+++ PSK  D  M V GVN+N+
Sbjct:    5 IAINGMGRIGRMVLRIALNNKNLNVKA-INASYPPETIAHLLNYDTTHGVY---DKKVEPIESGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQ 139          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: E4PD_SALEP (D-erythrose-4-phosphate dehydrogenase OS=Salmonella enteritidis PT4 (strain P125109) GN=epd PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.186e-11
Identity = 49/148 (33.11%), Postives = 77/148 (52.03%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNENEYKPE 514
            V+I INGFGRIGR V R + +   R ++ +VA I+       M ++ KYD+ HG++     +V+ ++  LF G+  + +   R   ++PW E G + V++ TGV+                V+ S P S D    VV GVN+NE + E
Sbjct:    3 VRIAINGFGRIGRNVVRALYESGRRAEITVVA-INELADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNELRAE 146          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: E4PD_SALDC (D-erythrose-4-phosphate dehydrogenase OS=Salmonella dublin (strain CT_02021853) GN=epd PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.186e-11
Identity = 49/148 (33.11%), Postives = 77/148 (52.03%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNENEYKPE 514
            V+I INGFGRIGR V R + +   R ++ +VA I+       M ++ KYD+ HG++     +V+ ++  LF G+  + +   R   ++PW E G + V++ TGV+                V+ S P S D    VV GVN+NE + E
Sbjct:    3 VRIAINGFGRIGRNVVRALYESGRRAEITVVA-INELADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNELRAE 146          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P1_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MW2) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 502
            VK+ INGFGRIGRL  R I + + +E+VAV D     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P1_STAAU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus GN=gapA1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 502
            VK+ INGFGRIGRL  R I + + +E+VAV D     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P1_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MSSA476) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 502
            VK+ INGFGRIGRL  R I + + +E+VAV D     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P1_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MRSA252) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 502
            VK+ INGFGRIGRL  R I + + +E+VAV D     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 502
            VK+ INGFGRIGRL  R I + + +E+VAV D     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P1_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 502
            VK+ INGFGRIGRL  R I + + +E+VAV D     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P1_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain COL) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 502
            VK+ INGFGRIGRL  R I + + +E+VAV D     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
The following BLAST results are available for this feature:
BLAST of DN135151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
G3P2_STAEQ5.326e-1230.94Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
E4PD_SALEP1.186e-1133.11D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALDC1.186e-1133.11D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
G3P1_STAAW1.550e-1133.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAU1.550e-1133.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAS1.550e-1133.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAR1.550e-1133.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAN1.550e-1133.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAM1.550e-1133.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAC1.550e-1133.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionwca07a02 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07a02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135151 ID=DN135151; Name=DN135151; organism=Citrus sinensis; type=EST; length=517bp
GGGGACCACNNNTGNNNNNCCTACTCTCTACAACTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTATTGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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