DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2919 contig Csv1_Contig2919:612..1314. BLAST: Citrus Unigene V1 Contigs to TAIR9
Homology
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CYCTA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cycas taitungensis GN=ndhH PE=3 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.315e-101
Identity = 175/200 (87.50%), Postives = 190/200 (95.00%), Query Frame = 3 
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++LATEK+   +IV+MGPHHPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTI+QYLPYVTRWDYLATMFTEA+TVN PE+LGNI+VPKRAS IRVIMLELSRIA HLLWLGPFMADIGAQTPFFYI RERE++YDLFEAATGMRMMHNYFRIGGVA DLPYGWIDKCLDFCDYFL+ VAEY++ ITRNPI
Sbjct:    1 MTVLATEKDS--VIVSMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIVQYLPYVTRWDYLATMFTEAVTVNAPERLGNIQVPKRASCIRVIMLELSRIAPHLLWLGPFMADIGAQTPFFYISREREIIYDLFEAATGMRMMHNYFRIGGVAVDLPYGWIDKCLDFCDYFLSKVAEYERLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_HORVU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Hordeum vulgare GN=ndhH PE=3 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 3.023e-101
Identity = 174/192 (90.62%), Postives = 184/192 (95.83%), Query Frame = 3 
Query:  126 EKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    7 KKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVVEYQQLITQNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_AGRST (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Agrostis stolonifera GN=ndhH-A PE=3 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 3.949e-101
Identity = 174/191 (91.10%), Postives = 183/191 (95.81%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVVEYQQLITQNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ORYSJ (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhH PE=3 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.157e-101
Identity = 174/191 (91.10%), Postives = 183/191 (95.81%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVIEYQQLITQNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ORYSI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oryza sativa subsp. indica GN=ndhH PE=3 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.157e-101
Identity = 174/191 (91.10%), Postives = 183/191 (95.81%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVIEYQQLITQNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ORYSA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oryza sativa GN=ndhH PE=3 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.157e-101
Identity = 174/191 (91.10%), Postives = 183/191 (95.81%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVIEYQQLITQNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ORYNI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oryza nivara GN=ndhH PE=3 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.157e-101
Identity = 174/191 (91.10%), Postives = 183/191 (95.81%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVIEYQQLITQNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_SACOF (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Saccharum officinarum GN=ndhH PE=3 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 6.736e-101
Identity = 173/193 (89.64%), Postives = 184/193 (95.34%), Query Frame = 3 
Query:  123 KEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENR+IIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGW+DKCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    6 KRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRSIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWMDKCLDFCDYFLQGVVEYQQLITQNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_SACHY (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Saccharum hybrid GN=ndhH PE=3 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 6.736e-101
Identity = 173/193 (89.64%), Postives = 184/193 (95.34%), Query Frame = 3 
Query:  123 KEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENR+IIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGW+DKCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    6 KRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRSIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWMDKCLDFCDYFLQGVVEYQQLITQNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_MAIZE (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Zea mays GN=ndhH PE=3 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 6.736e-101
Identity = 173/193 (89.64%), Postives = 183/193 (94.82%), Query Frame = 3 
Query:  123 KEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENR+IIQYLPYVTRWDYLATMFTEAITVN PE L NI++PKRASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEA TGMRMMHNYFRIGGVAADLPYGW+DKCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    6 KRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRSIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPKRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAVTGMRMMHNYFRIGGVAADLPYGWMDKCLDFCDYFLQGVVEYQELITQNPI 198
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHH_CYCTA2.315e-10187.50NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_HORVU3.023e-10190.63NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_AGRST3.949e-10191.10NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_ORYSJ5.157e-10191.10NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_ORYSI5.157e-10191.10NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_ORYSA5.157e-10191.10NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_ORYNI5.157e-10191.10NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_SACOF6.736e-10189.64NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_SACHY6.736e-10189.64NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_MAIZE6.736e-10189.64NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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