DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2919 contig Csv1_Contig2919:612..1314. BLAST: Citrus Unigene V1 Contigs to TAIR9
Homology
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_WHEAT (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Triticum aestivum GN=ndhH PE=3 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.149e-100
Identity = 173/191 (90.58%), Postives = 183/191 (95.81%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWI+KCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIEKCLDFCDYFLRGVVEYQQLITQNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_BRADI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Brachypodium distachyon GN=ndhH PE=3 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.149e-100
Identity = 173/191 (90.58%), Postives = 183/191 (95.81%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWI+KCLDFCDYFL GV EYQ+ IT+NPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIEKCLDFCDYFLRGVVEYQQLITQNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_FESAR (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Festuca arundinacea GN=ndhH PE=3 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 1.960e-100
Identity = 172/191 (90.05%), Postives = 183/191 (95.81%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFL G++EYQ+ I +NPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGISEYQQLIKQNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_LOLPR (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lolium perenne GN=ndhH PE=3 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 3.343e-100
Identity = 172/191 (90.05%), Postives = 182/191 (95.29%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NI++P+RASYIRVIMLELSRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFL G+ EYQ+ I +NPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGIIEYQQLIKQNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CHLAT (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Chlorokybus atmophyticus GN=ndhH PE=3 SV=2)

HSP 1 Score: 362.073 bits (928), Expect = 1.659e-99
Identity = 170/200 (85.00%), Postives = 187/200 (93.50%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++L T+ +   M+++MGPHHPSMHGVLRLIVTLDGE+VIDCEP+LG+LHRGMEKIAENRTI+QYLPYVTRWDYLATMFTEAITVN PE+L NI VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE++YDLFEAATGMRMMHNYFRIGGVAADLPYGW+DKCLDFCDYFL  V EY++ IT NPI
Sbjct:    1 MTMLETKTDP--MVISMGPHHPSMHGVLRLIVTLDGENVIDCEPVLGYLHRGMEKIAENRTIVQYLPYVTRWDYLATMFTEAITVNAPERLANIEVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREMIYDLFEAATGMRMMHNYFRIGGVAADLPYGWVDKCLDFCDYFLPKVDEYERLITNNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CRYJA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cryptomeria japonica GN=ndhH PE=3 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 4.827e-99
Identity = 167/198 (84.34%), Postives = 184/198 (92.93%), Query Frame = 3
Query:  108 ILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            ++   +EK+ M+V+MGPHHPSMHGVLRLIVTLDGEDVIDCEP+LG+LHRGMEKIAENRTI+QYLPYVTRWDYLATMFTEAITVN PE+L NI++PKRASYIR+IMLELSRIASHLLWLGPFMADIGAQTPFFYI RERE++YDLFEAATGMRMMHNYFRIGGVA DLPYGWIDKCLDFC YF   V EY++ ITRNPI
Sbjct:    1 MIMVAREKDLMMVSMGPHHPSMHGVLRLIVTLDGEDVIDCEPVLGYLHRGMEKIAENRTIVQYLPYVTRWDYLATMFTEAITVNAPEKLENIQIPKRASYIRMIMLELSRIASHLLWLGPFMADIGAQTPFFYILREREMIYDLFEAATGMRMMHNYFRIGGVAVDLPYGWIDKCLDFCYYFFPKVTEYERLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_MARPO (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Marchantia polymorpha GN=ndhH PE=3 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 8.234e-99
Identity = 170/200 (85.00%), Postives = 184/200 (92.00%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M IL   K    MIV+MGPHHPSMHGVLRLIVTLDGEDV+DCEP+LG+LHRGMEKIAENRTI+QYLPYVTRWDYLATMFTEAITVN PE+L NI+VPKRASYIR+IMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE++YDLFE+ATGMRMMHNYFRIGGVA DLPYGWIDKCLDFCDYFL  + EY++ IT NPI
Sbjct:    1 MMILTKNKP---MIVSMGPHHPSMHGVLRLIVTLDGEDVLDCEPVLGYLHRGMEKIAENRTIVQYLPYVTRWDYLATMFTEAITVNAPEKLTNIQVPKRASYIRIIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREMIYDLFESATGMRMMHNYFRIGGVAVDLPYGWIDKCLDFCDYFLPKINEYERLITNNPI 197          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_PSINU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Psilotum nudum GN=ndhH PE=3 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.075e-98
Identity = 168/193 (87.05%), Postives = 180/193 (93.26%), Query Frame = 3
Query:  123 KEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K K+ MIV+MGPHHPSMHGVLRLIVTLDGE+V DCEP+LG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE+L NIR+PKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYI RERE++YDLFEAATGMRMMHNYFRIGGVA DLPYGWIDKCLDFCDYF   ++EY+K I  NPI
Sbjct:    6 KNKDQMIVSMGPHHPSMHGVLRLIVTLDGENVADCEPVLGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEKLANIRIPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYILREREMIYDLFEAATGMRMMHNYFRIGGVAVDLPYGWIDKCLDFCDYFSPKISEYEKLIVHNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_STAPU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Staurastrum punctulatum GN=ndhH PE=3 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.404e-98
Identity = 168/200 (84.00%), Postives = 187/200 (93.50%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++L T+ +   MIV+MGPHHPSMHGVLRLIVTLDGE+VIDCEPILG+LHRGMEKIAENRT +QYLPYVTRWDYLATMFTEA+TVN PE+L NI+VPKRASYIRVIMLELSR+ASHLLWLGPFMADIGAQTPFFYIFRERE++YDLFE+ATGMRMMHNYFRIGGVA DLPYGW+DKCLDFCDYFL  + EY++ ITRNPI
Sbjct:    1 MTMLKTKADP--MIVSMGPHHPSMHGVLRLIVTLDGENVIDCEPILGYLHRGMEKIAENRTTLQYLPYVTRWDYLATMFTEAVTVNAPERLANIQVPKRASYIRVIMLELSRLASHLLWLGPFMADIGAQTPFFYIFREREMIYDLFESATGMRMMHNYFRIGGVAVDLPYGWVDKCLDFCDYFLPKIDEYERLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ANGEV (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Angiopteris evecta GN=ndhH PE=3 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 2.396e-98
Identity = 169/200 (84.50%), Postives = 186/200 (93.00%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++LAT+K+   MIV+MGP HPSMHGVLRLIVT DGE+VIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE+L NI++PKRASYIR+IMLELSRIASHLLWLGPFMAD+GAQTPFFYIFRERE++YDLFEAATGMRMMHNYFRIGGVA D PYGW+DKCLDFCDYFL  V EY++ IT NPI
Sbjct:    1 MTMLATKKDP--MIVSMGPQHPSMHGVLRLIVTSDGENVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEKLANIQIPKRASYIRIIMLELSRIASHLLWLGPFMADVGAQTPFFYIFREREMIYDLFEAATGMRMMHNYFRIGGVAVDFPYGWVDKCLDFCDYFLPKVDEYEQLITNNPI 198          
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHH_WHEAT1.149e-10090.58NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_BRADI1.149e-10090.58NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_FESAR1.960e-10090.05NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_LOLPR3.343e-10090.05NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_CHLAT1.659e-9985.00NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_CRYJA4.827e-9984.34NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_MARPO8.234e-9985.00NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_PSINU1.075e-9887.05NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_STAPU1.404e-9884.00NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_ANGEV2.396e-9884.50NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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