DN135111
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_RAT (40S ribosomal protein S16 OS=Rattus norvegicus GN=Rps16 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 8.299e-26 Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 1 Query: 94 PVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 P++SVQ FGRKKTA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RV GGH +QIYA Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYA 83
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_PIG (40S ribosomal protein S16 OS=Sus scrofa GN=RPS16 PE=2 SV=4) HSP 1 Score: 115.546 bits (288), Expect = 8.299e-26 Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 1 Query: 94 PVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 P++SVQ FGRKKTA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RV GGH +QIYA Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYA 83
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_MOUSE (40S ribosomal protein S16 OS=Mus musculus GN=Rps16 PE=2 SV=4) HSP 1 Score: 115.546 bits (288), Expect = 8.299e-26 Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 1 Query: 94 PVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 P++SVQ FGRKKTA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RV GGH +QIYA Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYA 83
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_HUMAN (40S ribosomal protein S16 OS=Homo sapiens GN=RPS16 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 8.299e-26 Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 1 Query: 94 PVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 P++SVQ FGRKKTA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RV GGH +QIYA Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYA 83
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_BOVIN (40S ribosomal protein S16 OS=Bos taurus GN=RPS16 PE=2 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 8.299e-26 Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 1 Query: 94 PVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 P++SVQ FGRKKTA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RV GGH +QIYA Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYA 83
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_ICTPU (40S ribosomal protein S16 OS=Ictalurus punctatus GN=rps16 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.154e-25 Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 94 PVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 P++SVQ FGRKKTA AV +CKRG GLIK+NG P+E +EP L++K EP+LLLG+ RFAGVD+R+RV GGH +Q+YA Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYA 83
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_HETFO (40S ribosomal protein S16 OS=Heteropneustes fossilis GN=rps16 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.154e-25 Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 94 PVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 P++SVQ FGRKKTA AV +CKRG GLIK+NG P+E +EP L++K EP+LLLG+ RFAGVD+R+RV GGH +Q+YA Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYA 83
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_SPOFR (40S ribosomal protein S16 OS=Spodoptera frugiperda GN=RpS16 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.175e-25 Identity = 47/82 (57.32%), Postives = 67/82 (81.71%), Query Frame = 1 Query: 82 AKAXPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 A+ P+++VQ FGRKKTA AV YCKRG G++++NG P++LVEP +L++K EPILLLG+ +F+GVD+R+ V GGH +Q+YA Sbjct: 7 ARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYA 88
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_SCHPO (40S ribosomal protein S16 OS=Schizosaccharomyces pombe GN=rps16a PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.565e-24 Identity = 50/77 (64.94%), Postives = 62/77 (80.52%), Query Frame = 1 Query: 97 VESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 ++SVQCFG+K A AV +CK G+GLIK+NG P+ LV+PEILR K YEPIL+ G +FAGVD+R+RV GGH SQIYA Sbjct: 1 MQSVQCFGKKGNATAVAHCKVGKGLIKVNGAPLSLVQPEILRMKVYEPILVAGADKFAGVDIRVRVSGGGHVSQIYA 77
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_CAEEL (40S ribosomal protein S16 OS=Caenorhabditis elegans GN=rps-16 PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 7.767e-24 Identity = 50/77 (64.94%), Postives = 63/77 (81.82%), Query Frame = 1 Query: 97 VESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 V+SVQ FGRKKTA AV +CK+G+GLIK+NG P+E +EP+ILR K EP+LL+G+ RF VD+RIRV GGH +QIYA Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDVDIRIRVSGGGHVAQIYA 81 The following BLAST results are available for this feature:
BLAST of DN135111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135111 ID=DN135111; Name=DN135111; organism=Citrus sinensis; type=EST; length=329bpback to top |