DN135077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS2_WHEAT (Ribulose bisphosphate carboxylase small chain PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.119e-25 Identity = 45/74 (60.81%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +VG+V RE++ PGYYDGRYWTMWKLPMFGC D++Q+LNE++E KK YP+AY+R + F+N +Q QC+SF+ +P Sbjct: 93 KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRP 166
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS2_FRIAG (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.119e-25 Identity = 45/72 (62.50%), Postives = 60/72 (83.33%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V R+N+K PGYYDGRYWTMWKLPMFGC D++Q++ E ECKK YP A+IR + F+N +Q QC+SF+++KP Sbjct: 107 GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25 Identity = 45/74 (60.81%), Postives = 60/74 (81.08%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 E G+V+REN++ PGYYDGRYWTMWKLPMFGC DS+Q++ E+ ECKK YP A+IR + F+N +Q QC+ F+ +P Sbjct: 102 EHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRP 175
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_CUCSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25 Identity = 46/72 (63.89%), Postives = 60/72 (83.33%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+REN + PG+YDGRYWTMWKLPMFGC DSSQ++ EI+E KK YP+A+IR + F+N +Q QC+SF+ KP Sbjct: 108 GFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS3_WHEAT (Ribulose bisphosphate carboxylase small chain clone 512 (Fragment) OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25 Identity = 44/74 (59.46%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +VG++ RE++ PGYYDGRYWTMWKLPMFGC D++Q++NE++E KK YP+AY+R + F+N +Q QC+SF+ KP Sbjct: 31 KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 104
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS1_WHEAT (Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 3.615e-25 Identity = 45/74 (60.81%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +VG+V RE++ PGYYDGRYWTMWKLPMFGC D++Q+LNE++E KK YP+AY+R + F+N +Q QC+SF+ +P Sbjct: 92 KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_MUSAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Musa acuminata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.722e-25 Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V REN + PGYYDGRYWTMWKLPMFGC D+ Q+ E++ECKK YP+A+IR + F+N +Q QC+SF+ KP Sbjct: 106 GFVWRENHRSPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQVQCISFIAYKP 177
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS1_FRIAG (Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic OS=Fritillaria agrestis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.722e-25 Identity = 44/72 (61.11%), Postives = 60/72 (83.33%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V R+N+K PGYYDGRYWTMWKLPMFGC D++Q++ E ECKK YP A+IR + F+N +Q QC+SF++++P Sbjct: 107 GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVERP 178
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_ZANAE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 6.167e-25 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +VG+V+RE PGYYDGRYWTMWKLPMFGC DSSQ+L E+ EC KAYP+ + R + F+N +Q QC+SFL KP Sbjct: 102 KVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS2_ORYSJ (Ribulose bisphosphate carboxylase small chain A, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS-A PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 6.167e-25 Identity = 45/74 (60.81%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +VG+V+REN + PGYYDGRYWTMWKLPMFGC D++Q+L E++E KKAYP+A++R + F+N +Q Q +SF+ KP Sbjct: 93 KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166 The following BLAST results are available for this feature:
BLAST of DN135077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135077 ID=DN135077; Name=DN135077; organism=Citrus sinensis; type=EST; length=490bpback to top |