DN135077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSJ (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 6.167e-25 Identity = 45/74 (60.81%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +VG+V+REN + PGYYDGRYWTMWKLPMFGC D++Q+L E++E KKAYP+A++R + F+N +Q Q +SF+ KP Sbjct: 93 KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 6.167e-25 Identity = 45/74 (60.81%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +VG+V+REN + PGYYDGRYWTMWKLPMFGC D++Q+L E++E KKAYP+A++R + F+N +Q Q +SF+ KP Sbjct: 93 KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS1_LEMGI (Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 6.167e-25 Identity = 44/72 (61.11%), Postives = 60/72 (83.33%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+REN+ PGYYDGRYWTMWKLPMFGC D+SQ++ E++E KKAYP ++R + F+N++Q QC+SF+ KP Sbjct: 101 GFVYRENNASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 172
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 8.054e-25 Identity = 46/74 (62.16%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 E G+V+RE++ PGYYDGRYWTMWKLPMFGC D++Q+ E+QE KKAYP+A+IR + F+N +Q QC+SF+ KP Sbjct: 104 EHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 8.054e-25 Identity = 46/74 (62.16%), Postives = 60/74 (81.08%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 E G+V+RE+++ P YYDGRYWTMWKLPMFGC D+SQ+L E+QE K AYPN +IR + F+N +Q QC+SF+ KP Sbjct: 102 EHGFVYREHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS6_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.052e-24 Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+REN PGYYDGRYWTMWKLPMFGC D+SQ++ E++E KKAYP ++R + F+N++Q QC+SF+ KP Sbjct: 105 GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS5_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.052e-24 Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+REN PGYYDGRYWTMWKLPMFGC D+SQ++ E++E KKAYP ++R + F+N++Q QC+SF+ KP Sbjct: 105 GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS4_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.052e-24 Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+REN PGYYDGRYWTMWKLPMFGC D+SQ++ E++E KKAYP ++R + F+N++Q QC+SF+ KP Sbjct: 105 GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS3_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.052e-24 Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+REN PGYYDGRYWTMWKLPMFGC D+SQ++ E++E KKAYP ++R + F+N++Q QC+SF+ KP Sbjct: 105 GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS2_LEMGI (Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.052e-24 Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+REN PGYYDGRYWTMWKLPMFGC D+SQ++ E++E KKAYP ++R + F+N++Q QC+SF+ KP Sbjct: 105 GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176 The following BLAST results are available for this feature:
BLAST of DN135077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135077 ID=DN135077; Name=DN135077; organism=Citrus sinensis; type=EST; length=490bpback to top |