DN135077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS6_MESCR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.343e-24 Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+RE+ PGYYDGRYWTMWKLPMFGC D SQ++ E++E KKAYP A+IR + F+N +Q QC+SF+ KP Sbjct: 110 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 181
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS5_MESCR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-5 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.343e-24 Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+RE+ PGYYDGRYWTMWKLPMFGC D SQ++ E++E KKAYP A+IR + F+N +Q QC+SF+ KP Sbjct: 106 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 177
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.343e-24 Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+RE+ PGYYDGRYWTMWKLPMFGC D SQ++ E++E KKAYP A+IR + F+N +Q QC+SF+ KP Sbjct: 107 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 178
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS3_MESCR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.343e-24 Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+RE+ PGYYDGRYWTMWKLPMFGC D SQ++ E++E KKAYP A+IR + F+N +Q QC+SF+ KP Sbjct: 107 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 178
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS3_AMAHP (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS3 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.343e-24 Identity = 44/71 (61.97%), Postives = 60/71 (84.51%), Query Frame = 3 Query: 33 YVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +V+REN + PGY DGRYWTMWKLPM+GC D +Q+LNE++E KKAYP+A+IR + F+N++Q QC+SF+ KP Sbjct: 107 FVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAFKP 177
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 2.343e-24 Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+RE+ PGYYDGRYWTMWKLPMFGC D SQ++ E++E KKAYP A+IR + F+N +Q QC+SF+ KP Sbjct: 106 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 177
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_PINTH (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.997e-24 Identity = 43/75 (57.33%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 21 DEVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 D G + R+ ++ PGYYDGRYW MWKLPMFGC ++SQ++NE++EC KAYP A+IR + F+N +Q QC+SF++ KP Sbjct: 96 DLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_MAIZE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.997e-24 Identity = 46/74 (62.16%), Postives = 60/74 (81.08%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +VG+V+RENS P YYDGRYWTMWKLPMFGCND++Q+ E+QE K+YP+A+ R + F+N KQ QC+SF+ KP Sbjct: 93 KVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHRVIGFDNIKQTQCVSFIAYKP 166
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS2_MESCR (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 8.904e-24 Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+RE+ PGYYDGRYWTMWKLPMFGC D SQ++ E++E KKAYP A+ R + F+N +Q QC+SF+ KP Sbjct: 104 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFTRIIGFDNVRQVQCISFIAYKP 175
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.984e-23 Identity = 42/71 (59.15%), Postives = 58/71 (81.69%), Query Frame = 3 Query: 33 YVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +V+REN++ PGYYDGRYW MWKLPMFGC D++Q+L E+QE K YP ++IR + F+N++Q QC+SF+ KP Sbjct: 109 FVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKP 179 The following BLAST results are available for this feature:
BLAST of DN135077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN135077 ID=DN135077; Name=DN135077; organism=Citrus sinensis; type=EST; length=490bpback to top |