DN135077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.419e-23 Identity = 42/74 (56.76%), Postives = 58/74 (78.38%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 E G+V+REN + PGYYDGRYWTMW+LP+FG DSSQ+L E+ +CK YP+++IR + F+N +Q QC+SF+ P Sbjct: 104 EKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS1_SPIOL (Ribulose bisphosphate carboxylase small chain OS=Spinacia oleracea GN=RBCS PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.538e-23 Identity = 42/72 (58.33%), Postives = 60/72 (83.33%), Query Frame = 3 Query: 30 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 G+V+RE+ K PGYYDGRYWTMWKLPMFG D +Q++NE++E KKA P+A++R + FN++++ QC+SF+ KP Sbjct: 49 GFVYREHDKSPGYYDGRYWTMWKLPMFGGTDPAQVVNEVEEVKKAPPDAFVRFIGFNDKREVQCISFIAYKP 120
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.679e-22 Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 E G+V+RE++K PGYYDGRYWTMWKLPMFG D+SQ+L E+ E AYP A++R + F+N +Q QC+SF+ P Sbjct: 104 EKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.679e-22 Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 E G+V+RE++K PGYYDGRYWTMWKLPMFG D+SQ+L E+ E AYP A++R + F+N +Q QC+SF+ P Sbjct: 104 EKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_TRIRP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.193e-22 Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 E G+VHR+ + PGYYDGRYWTMW+LP+FG D++Q+L E+ ECK YP A+IR + F+N +Q QC+SF+ P Sbjct: 102 EKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTP 175
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.193e-22 Identity = 43/74 (58.11%), Postives = 58/74 (78.38%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 E G V+RE++++PGYYDGRYWTMWKLPMFGC D++Q+L E+ E K +P+ Y R + F+N +Q QC+SFL KP Sbjct: 106 EHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKP 179
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.886e-22 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 E G V+RE + PGYYDGRYWTMWKLPMFGC D+ Q+L E+ E KAYP+ Y R + F+N +Q QC+SFL KP Sbjct: 106 EHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKP 179
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_CHLMO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Chlamydomonas moewusii GN=RBCS PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.857e-21 Identity = 41/61 (67.21%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 63 GYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 GYYD RYWTMWKLPMFGC D SQ+L E+ C+ A+PN YIR +AF+N KQ QCM FL+Q+P Sbjct: 94 GYYDNRYWTMWKLPMFGCTDPSQVLREVSACQVAFPNVYIRLVAFDNVKQVQCMGFLVQRP 154
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_AEGTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Aegilops tauschii GN=RBCS PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.203e-20 Identity = 39/74 (52.70%), Postives = 56/74 (75.68%), Query Frame = 3 Query: 24 EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 +VG++ RE++ PGYYDGRYWTMWKLPMFGC +Q++ E++E +K YP+ Y R + F+N +Q Q +SF+ KP Sbjct: 93 KVGFIFREHNVSPGYYDGRYWTMWKLPMFGCPAPTQVIPEVEEVRKEYPDPYCRIIGFDNMRQVQSVSFIASKP 166
BLAST of DN135077 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.053e-20 Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 63 GYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 GYYD RYWTMWKLPMFGC D+SQ+L EI EC++AYP Y+R AF++ KQ Q +SF++Q+P Sbjct: 200 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 260 HSP 2 Score: 98.2117 bits (243), Expect = 2.053e-20 Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 63 GYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 GYYD RYWTMWKLPMFGC D+SQ+L EI EC++AYP Y+R AF++ KQ Q +SF++Q+P Sbjct: 344 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 404 HSP 3 Score: 98.2117 bits (243), Expect = 2.053e-20 Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 63 GYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 GYYD RYWTMWKLPMFGC D+SQ+L EI EC++AYP Y+R AF++ KQ Q +SF++Q+P Sbjct: 631 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 691 HSP 4 Score: 98.2117 bits (243), Expect = 2.053e-20 Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 63 GYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 GYYD RYWTMWKLPMFGC D+SQ+L EI EC++AYP Y+R AF++ KQ Q +SF++Q+P Sbjct: 774 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 834 HSP 5 Score: 98.2117 bits (243), Expect = 2.053e-20 Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 63 GYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 GYYD RYWTMWKLPMFGC D+SQ+L EI EC++AYP Y+R AF++ KQ Q +SF++Q+P Sbjct: 1062 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 1122 HSP 6 Score: 98.2117 bits (243), Expect = 2.053e-20 Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 63 GYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 GYYD RYWTMWKLPMFGC D+SQ+L EI EC++AYP Y+R AF++ KQ Q +SF++Q+P Sbjct: 1206 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 1266 HSP 7 Score: 96.2857 bits (238), Expect = 7.801e-20 Identity = 38/61 (62.30%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 63 GYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 GYYD YWTMWKLPMFGC D+SQ+L EI EC++AYP Y+R AF++ KQ Q +SF++Q+P Sbjct: 487 GYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 547 HSP 8 Score: 95.9005 bits (237), Expect = 1.019e-19 Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 3 Query: 63 GYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 245 GYYD RYWTMWKLPMFGC D+SQ+L EI EC++AYP Y+R LAF++ KQ Q +SF++Q+P Sbjct: 919 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVR-LAFDSVKQVQVISFVVQRP 978 The following BLAST results are available for this feature:
BLAST of DN135077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135077 ID=DN135077; Name=DN135077; organism=Citrus sinensis; type=EST; length=490bpback to top |