DN135075

Overview
NameDN135075
Unique NameDN135075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN135075_ssr107 microsatellite DN135075_ssr107:107..122. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: JJJ1_YEAST (J protein JJJ1 OS=Saccharomyces cerevisiae GN=JJJ1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYD 532
            +Y+LLG+    S +E+K+AY++ A +YHPD +P D VEE TQ+F  ++ AYE LSDP  RA YD
Sbjct:    5 YYELLGVETHASDLELKKAYRKKALQYHPDKNP-DNVEEATQKFAVIRAAYEVLSDPQERAWYD 67          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_HALHL (Chaperone protein dnaJ OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 33/65 (50.77%), Postives = 48/65 (73.85%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            +Y++LG+ ++ S  EIK+AY++MA+K+HPD +P D  EE  +RF  V+EAYE LSD   RA YD+
Sbjct:    6 YYEVLGVNKNASDAEIKKAYRRMAQKFHPDRNPGD--EESAERFKEVKEAYEVLSDAQKRAAYDQ 68          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_ERYRH (Chaperone protein dnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            FY++LG+ +S +  EIK+AY+Q+A+KYHPD++  D  E    +F  VQEAYE LSD   RA YD+
Sbjct:    7 FYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAE---AKFKEVQEAYEVLSDSQKRANYDQ 68          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLPN (Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 2
Query:  335 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            + +Y +LGI ++ S  EIK+AY+++A KYHPD +P D   E  +RF  V EAYE LSDP  R  YDR
Sbjct:    1 MDYYSILGISKTASAEEIKKAYRKLAVKYHPDKNPGDAAAE--KRFKEVSEAYEVLSDPQKRDSYDR 65          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTH (Chaperone protein dnaJ OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.141e-11
Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            +Y++LG+    S  EIK+AY+++A++YHPD++P D+  E   +F  + EAYE LSDP  RA YD+
Sbjct:    7 YYEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAE--AKFKEINEAYEVLSDPQKRARYDQ 69          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein dnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            FY++LG+  S    E+K+AY+++ARKYHPDV+     EE   +F  +  AYE LSDP  RA YDR
Sbjct:    5 FYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEE---KFKEINRAYEVLSDPQARANYDR 66          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA5 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype V GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAF 565
            FYD LG+ +  S  EIK+AY++M++KYHPD++     EE   ++  VQEAYETLSD   RA YD+  + G +  F
Sbjct:    6 FYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKETGAEE---KYKEVQEAYETLSDTQKRAAYDQYGAAGANGGF 77          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA3 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype III GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAF 565
            FYD LG+ +  S  EIK+AY++M++KYHPD++     EE   ++  VQEAYETLSD   RA YD+  + G +  F
Sbjct:    6 FYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKETGAEE---KYKEVQEAYETLSDTQKRAAYDQYGAAGANGGF 77          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP4 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            +YD+LG+       ++KQAY+++ARKYHPDV+     EE   RF  +  AYE LSDP  RA YDR
Sbjct:    5 YYDILGVSRDAGQEDLKQAYRRLARKYHPDVNKEAGAEE---RFKEINRAYEVLSDPETRARYDR 66          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLCV (Chaperone protein dnaJ OS=Chlamydophila caviae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 2
Query:  335 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            + +YD+LG+ ++ S  EIK++Y+++A KYHPD +P D   E  +RF  V EAYE LSDP  R  YDR
Sbjct:    1 MDYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGD--AEAEKRFKEVSEAYEVLSDPQKRESYDR 65          
The following BLAST results are available for this feature:
BLAST of DN135075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
JJJ1_YEAST3.937e-1151.56J protein JJJ1 OS=Saccharomyces cerevisiae GN=JJJ1... [more]
DNAJ_HALHL3.937e-1150.77Chaperone protein dnaJ OS=Halorhodospira halophila... [more]
DNAJ_ERYRH3.937e-1150.77Chaperone protein dnaJ OS=Erysipelothrix rhusiopat... [more]
DNAJ_CHLPN3.937e-1150.75Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=... [more]
DNAJ_CLOTH5.141e-1146.15Chaperone protein dnaJ OS=Clostridium thermocellum... [more]
DNAJ_THEEB6.715e-1149.23Chaperone protein dnaJ OS=Thermosynechococcus elon... [more]
DNAJ_STRA56.715e-1146.67Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]
DNAJ_STRA36.715e-1146.67Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]
DNAJ_CYAP46.715e-1149.23Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_CHLCV6.715e-1149.25Chaperone protein dnaJ OS=Chlamydophila caviae GN=... [more]

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Properties
Property NameValue
Genbank descriptionwca05g12 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca05g12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135075 ID=DN135075; Name=DN135075; organism=Citrus sinensis; type=EST; length=624bp
GGGGATACTTTATTANNNNAAAACTAAGGCCAAAAATAAAAAAAAATAAA
ACCAGCAACAGAATAAGATCAGAGCACCGCAAACAGAGGGAGTTGAGTGT
GAAAACGAGAGAGAGAGAGAGATGCGTTGCAGCAGCTATGGATTGATAAT
TCCCGGAAGCGAATCCCGCTTCCTGACCACCACCACTACCCCAACCACCA
ACAAAAAACCTGACCGGTTTCCCCGGATTTACCCGACCAGCGTATCATTC
GGGTCGTTGAAAGTGAAGGCGAAATTAAACGACGCCGCCGGTGGTACGGC
TACTGCTACTGCTGTAGTCGACGAATCGAAGGAGCTGAGCTTCTACGATC
TCTTGGGCATACCGGAGTCCGTGAGCTTGGTGGAGATAAAGCAGGCGTAT
AAGCAGATGGCCCGCAAGTACCATCCTGACGTATCGCCGCCGGATCGGGT
CGAGGAATACACCCAGCGGTTTATTCGGGTCCAGGAGGCCTATGAAACGC
TGTCGGATCCCGGATTGCGTGCTCTCTACGATCGCGACTTGTCCATGGGC
CTTCACCTCGCTTTCTCCGCCCGAAGACGCCAGCAAAACGACGTGGTATT
GTTTATTTATTCGCTTCATTCTTG
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