DN135075

Overview
NameDN135075
Unique NameDN135075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN135075_ssr107 microsatellite DN135075_ssr107:107..122. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLAB (Chaperone protein dnaJ OS=Chlamydophila abortus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 2
Query:  335 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            + +YD+LG+ ++ S  EIK++Y+++A KYHPD +P D   E  +RF  V EAYE LSDP  R  YDR
Sbjct:    1 MDYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGD--AEAEKRFKEVSEAYEVLSDPQKRESYDR 65          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSK (Chaperone protein dnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 30/65 (46.15%), Postives = 49/65 (75.38%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            +Y++LG+  + S+ E+K+AY+++ARKYHPDV   ++ E+   +F  V+EAY+TLSDP  +A YD+
Sbjct:    6 YYEVLGVDRNASVEEVKKAYRKLARKYHPDV---NKEEDAEAKFKEVKEAYDTLSDPQKKARYDQ 67          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCN (Chaperone protein dnaJ OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            +Y++LG+ +S S  EIK+AY+++A+KYHPDVS   + E   ++F  VQEAYE LSD   RA YD+
Sbjct:    6 YYEVLGVSKSASKDEIKKAYRRLAKKYHPDVS---KEENAVEKFKEVQEAYEVLSDEQKRAQYDQ 67          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_AZOVD (Chaperone protein dnaJ OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR------DLSMGLHLAFSARRRQQNDVVLFIYS 613
            +Y++LG+       E+K+AY+++A KYHPD +P D+  E  ++F  V EAYE LSD G R  YD+      D SMG    F A     +D+   ++S
Sbjct:    6 YYEVLGVERGAGEAELKKAYRRLAMKYHPDRNPDDKSAE--EKFKEVNEAYEVLSDAGKRMAYDQYGHAGVDQSMGGGAGFGAGGANFSDIFGDVFS 100          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNE7 (Chaperone protein dnaJ OS=Synechococcus elongatus (strain PCC 7942) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            +Y LLGIP+S     IK A++++AR+ HPD++P DR  E  +RF ++ EAYE LSDP  RA Y R
Sbjct:    7 YYALLGIPQSADQAAIKAAFRKLARQCHPDLNPGDRQAE--ERFKQISEAYEILSDPDRRAEYQR 69          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA1 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype Ia GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAF 565
            FYD LG+ +  S  EIK+AY++M++KYHPD++     EE   ++  VQEAYETLSD   RA YD+  + G +  F
Sbjct:    6 FYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKEAGAEE---KYKEVQEAYETLSDTQKRAAYDQYGAAGANGGF 77          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAC (Chaperone protein dnaJ OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            FY++LG+P++ S  EIK+AY+++A K+HPD +  D  +   ++F   +EAYE LSDP  RA YD+
Sbjct:    6 FYEVLGVPKNASDEEIKKAYRKLAMKHHPDRNQGDAAKPAEEKFKEAKEAYEMLSDPQKRAAYDQ 70          
The following BLAST results are available for this feature:
BLAST of DN135075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
DNAJ_CHLAB6.715e-1149.25Chaperone protein dnaJ OS=Chlamydophila abortus GN... [more]
DNAJ_BACSK6.715e-1146.15Chaperone protein dnaJ OS=Bacillus clausii (strain... [more]
DNAJ_BACCN6.715e-1150.77Chaperone protein dnaJ OS=Bacillus cereus subsp. c... [more]
DNAJ_AZOVD6.715e-1138.14Chaperone protein dnaJ OS=Azotobacter vinelandii (... [more]
DNAJ_SYNE78.770e-1150.77Chaperone protein dnaJ OS=Synechococcus elongatus ... [more]
DNAJ_STRA18.770e-1146.67Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]
DNAJ_ACIAC8.770e-1146.15Chaperone protein dnaJ OS=Acidovorax avenae subsp.... [more]

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Properties
Property NameValue
Genbank descriptionwca05g12 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca05g12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135075 ID=DN135075; Name=DN135075; organism=Citrus sinensis; type=EST; length=624bp
GGGGATACTTTATTANNNNAAAACTAAGGCCAAAAATAAAAAAAAATAAA
ACCAGCAACAGAATAAGATCAGAGCACCGCAAACAGAGGGAGTTGAGTGT
GAAAACGAGAGAGAGAGAGAGATGCGTTGCAGCAGCTATGGATTGATAAT
TCCCGGAAGCGAATCCCGCTTCCTGACCACCACCACTACCCCAACCACCA
ACAAAAAACCTGACCGGTTTCCCCGGATTTACCCGACCAGCGTATCATTC
GGGTCGTTGAAAGTGAAGGCGAAATTAAACGACGCCGCCGGTGGTACGGC
TACTGCTACTGCTGTAGTCGACGAATCGAAGGAGCTGAGCTTCTACGATC
TCTTGGGCATACCGGAGTCCGTGAGCTTGGTGGAGATAAAGCAGGCGTAT
AAGCAGATGGCCCGCAAGTACCATCCTGACGTATCGCCGCCGGATCGGGT
CGAGGAATACACCCAGCGGTTTATTCGGGTCCAGGAGGCCTATGAAACGC
TGTCGGATCCCGGATTGCGTGCTCTCTACGATCGCGACTTGTCCATGGGC
CTTCACCTCGCTTTCTCCGCCCGAAGACGCCAGCAAAACGACGTGGTATT
GTTTATTTATTCGCTTCATTCTTG
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