DN134927

Overview
NameDN134927
Unique NameDN134927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.734e-52
Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 3
Query:  159 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGW 512
            MAKSSFK EH LE+R AE+ARIREKYPDRIPVIVEKAEK+D+P IDKKKYLVPADL+VGQFVYV+RKRIKLSAEKAIF+FV N LPP GALMS++YEE KD+DGFLY+TYSGENTFG+
Sbjct:    1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = 3
Query:  168 SSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            SSFK EHP E+R AE+ RIR KYPDRIPVI EKA+++D+PDIDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+F+ N LPPT ALMS IYEE KD DGFLY+TYSGENTFG
Sbjct:    2 SSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.461e-47
Identity = 89/119 (74.79%), Postives = 107/119 (89.92%), Query Frame = 3
Query:  159 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWS 515
            M+  SF+ +H  E+R AE+ RIREKY DR+PVIVEK+EK+D+P+IDKKKYLVPADL+VGQFVYV+RKRI+LSAEKAIF+FV N LPPTGA+MS IY+ENK+EDGFLY+TYSGENTFG S
Sbjct:    1 MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGSS 119          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47
Identity = 90/116 (77.59%), Postives = 105/116 (90.52%), Query Frame = 3
Query:  168 SSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWS 515
            S FK++   E+R AE+ RIREKYPDRIPVIVEKAEK++VP+IDKKKYLVP+DL+VGQFVYV+RKRIKLSAEKAIF+FV N LPPTG LMS++YE+ KDEDGFLY+TYSGENTFG S
Sbjct:    5 SIFKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGAS 120          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_LACBI (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 3.600e-46
Identity = 87/115 (75.65%), Postives = 102/115 (88.70%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            +S FK EHP E+R AE+ RIR+KYPDRIPVI EKA++TD+P IDKKKYLVP+DL+VGQFVYV+RKRIKL+ EKAIF+FV   LPPT ALMSAIYEE+KDED FLY++YSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPPTAALMSAIYEEHKDEDNFLYVSYSGENTFG 116          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 4.701e-46
Identity = 87/115 (75.65%), Postives = 103/115 (89.57%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            +S FK EHP E+R AE+ RIR+KY DR+PVI EK EK+D+P IDKKKYLVPADL+VGQFVYV+RKRIKLS+E+AIF+FV + LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRRAEAERIRKKYDDRVPVICEKVEKSDIPVIDKKKYLVPADLTVGQFVYVIRKRIKLSSERAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTFG 116          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.047e-45
Identity = 90/120 (75.00%), Postives = 104/120 (86.67%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWSF*E 524
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV++TLPPT ALMS+IYE +KDEDGFLY+TYSGENTFG  F E
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYTDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTFGDLFEE 121          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.368e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.368e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa GN=atg-8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.368e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of DN134927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8F_ARATH5.734e-5283.05Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8_PHYIN1.119e-4778.95Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8G_ARATH1.461e-4774.79Autophagy-related protein 8g OS=Arabidopsis thalia... [more]
ATG8E_ARATH2.493e-4777.59Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8_LACBI3.600e-4675.65Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
ATG8_YARLI4.701e-4675.65Autophagy-related protein 8 OS=Yarrowia lipolytica... [more]
ATG8_MAGGR1.047e-4575.00Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]
ATG8_PODAN1.368e-4576.52Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_PENCW1.368e-4576.52Autophagy-related protein 8 OS=Penicillium chrysog... [more]
ATG8_NEUCR1.368e-4576.52Autophagy-related protein 8 OS=Neurospora crassa G... [more]

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Properties
Property NameValue
Genbank descriptionwca03d11 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03d11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134927 ID=DN134927; Name=DN134927; organism=Citrus sinensis; type=EST; length=698bp
CTTAACAAAANNNNTCCTAAAATAACAAAATAAATTCTCCACAATCAACC
GATCAATCAATCAATCAATCAAATACCTTGAAACCCTACTAATTTCCTTC
TCTTCTCCGATCCACTTCTCGTGTTGTGTTGAAGAGTCATCGTAGCGTCA
GTTTCGCCATGGCCAAAAGTTCATTCAAGCTCGAGCATCCATTGGAGAGG
AGGCTGGCAGAATCTGCTCGCATTAGAGAGAAGTATCCTGACAGGATTCC
GGTGATTGTGGAGAAGGCTGAGAAGACTGATGTTCCTGACATTGACAAGA
AAAAATACCTTGTCCCAGCGGATTTATCTGTGGGACAATTTGTTTATGTT
GTCCGTAAAAGGATTAAGCTCAGTGCAGAAAAGGCCATATTTGTTTTTGT
TAAGAATACTTTACCTCCAACCGGTGCCTTGATGTCTGCTATATATGAGG
AAAACAAGGATGAAGATGGTTTTCTTTACATGACTTACAGTGGAGAGAAT
ACCTTCGGTTGGTCATTTTAAGAGCAAAGGCAACAAGCCATGTATCATAA
AATTTGAAAGTTGTATATTCTCAGTTGATCCCTTTTAAGCCATTCCCAGA
CATGTTCACTGATATCTTGTTTTTATTTTGGGTTGATTGCATCAGTTGAT
AGAAGTAACTCTCGTTAAAATTGGCCCTTAGCGGTAGATATTGAATGG
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