DN134927

Overview
NameDN134927
Unique NameDN134927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_CANAL (Autophagy-related protein 8 OS=Candida albicans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.354e-43
Identity = 80/115 (69.57%), Postives = 99/115 (86.09%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            +S FK EHP E+R AE+ARI +++ DR+PVI EK E +D+P+IDK+KYLVP DL+VGQFVYV+RKRIKL +EKAIF+FV + LPPT AL+S IYEE+KDEDGFLY+ YSGENTFG
Sbjct:    2 RSQFKDEHPFEKRQAEAARIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_SCHPO (Autophagy-related protein 8 OS=Schizosaccharomyces pombe GN=atg8 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.299e-43
Identity = 84/118 (71.19%), Postives = 97/118 (82.20%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWSF 518
            +S FK +   E+R  ES RIREKYPDRIPVI EK +K+D+  IDKKKYLVP+DL+VGQFVYV+RKRIKLS EKAIF+F+   LPPT ALMS IYEE+K EDGFLY+TYSGENTFG  F
Sbjct:    2 RSQFKDDFSFEKRKTESQRIREKYPDRIPVICEKVDKSDIAAIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFIDEILPPTAALMSTIYEEHKSEDGFLYITYSGENTFGTVF 119          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_PICST (Autophagy-related protein 8 OS=Pichia stipitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.299e-43
Identity = 80/115 (69.57%), Postives = 98/115 (85.22%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            +S FK EHP E+R AE+ RI +++ DR+PVI EK E +D+P+IDK+KYLVP DLSVGQFVYV+RKRIKL +EKAIF+FV + LPPT AL+S IYEE+KDEDGFLY+ YSGENTFG
Sbjct:    2 RSQFKDEHPFEKRQAEATRIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLSVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_PICAN (Autophagy-related protein 8 OS=Pichia angusta GN=ATG8 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.416e-42
Identity = 81/115 (70.43%), Postives = 100/115 (86.96%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            +S FK EHP ERR AE++RIR K+ DRIPVI EK E++D+P+IDK+KYLVP+DL+VGQFVYV+RKRI+L +EKAIF+FV + LPPT +LMS IYE+ KDEDGFLY+ YSGENTFG
Sbjct:    2 RSQFKDEHPFERRKAEASRIRGKFLDRIPVICEKVEESDIPEIDKRKYLVPSDLTVGQFVYVIRKRIQLPSEKAIFIFVNDILPPTASLMSTIYEQYKDEDGFLYILYSGENTFG 116          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_LODEL (Autophagy-related protein 8 OS=Lodderomyces elongisporus GN=ATG8 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.416e-42
Identity = 79/115 (68.70%), Postives = 99/115 (86.09%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            +S FK EHP E+R AE+ARI +++ DR+PVI EK E +D+P+IDK+KYLVP DL+VGQFVYV+RKRIKL +EKAIF+FV + LPPT AL+S IYEE+KD+DGFLY+ YSGENTFG
Sbjct:    2 RSQFKDEHPFEKRQAEAARIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDDDGFLYVLYSGENTFG 116          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_DEBHA (Autophagy-related protein 8 OS=Debaryomyces hansenii GN=ATG8 PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.849e-42
Identity = 80/115 (69.57%), Postives = 98/115 (85.22%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            +S FK EHP E+R AE+ RI +++ DR+PVI EKAE +D+ +IDK+KYLVP DLSVGQFVYV+RKRIKL +EKAIF+F+ + LPPT ALMS IYEE+KDEDGFLY+ YSGENTFG
Sbjct:    2 RSQFKDEHPFEKRKAEATRITQRFNDRLPVICEKAENSDIQEIDKRKYLVPGDLSVGQFVYVIRKRIKLPSEKAIFIFINDILPPTAALMSTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_ASHGO (Autophagy-related protein 8 OS=Ashbya gossypii GN=ATG8 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.379e-42
Identity = 78/114 (68.42%), Postives = 101/114 (88.60%), Query Frame = 3
Query:  168 SSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            SSFK E+P E+R AES RI  ++ +R+PVI E+AEK+D+P++D++KYLVPADL+VGQFVYV+R+RIKL AEKAIF+FV +TLPPT ALM A+Y+E+KD+DGFLY+ YSGENTFG
Sbjct:    2 SSFKSEYPFEKRKAESERICSQFENRVPVICERAEKSDIPEVDRRKYLVPADLTVGQFVYVIRRRIKLPAEKAIFIFVNDTLPPTAALMFAVYQEHKDKDGFLYVKYSGENTFG 115          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.175e-42
Identity = 80/115 (69.57%), Postives = 100/115 (86.96%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            KS+FK E P E+R AES RI +K+ +RIPVI E+  K+D+PDIDK+KYLVP DL+VGQFVYV+RKRIKL AEKAIF+FV +TLPPT ALMS+IY+++KD+DGFLY++YS ENTFG
Sbjct:    2 KSAFKSEFPFEKRKAESERIVQKFHNRIPVICERGGKSDIPDIDKRKYLVPGDLTVGQFVYVIRKRIKLPAEKAIFIFVNDTLPPTAALMSSIYQQHKDKDGFLYVSYSSENTFG 116          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: ATG8_DICDI (Autophagy-related protein 8 OS=Dictyostelium discoideum GN=atg8 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.014e-40
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 3
Query:  168 SSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRI-KLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 509
            SSFK +HPL++R   + RIR KY DRIPVIVEKA ++D PDIDKKKYLVPAD++VG+FVY +RK + K+SAEKAI++FV NT+PPT AL+S IYE  KDEDGFLY+TYSGENTFG
Sbjct:    5 SSFKNDHPLDKRREVAERIRSKYLDRIPVIVEKAPRSDAPDIDKKKYLVPADITVGKFVYEIRKHMTKVSAEKAIYLFVNNTIPPTAALISQIYERYKDEDGFLYITYSGENTFG 119          
BLAST of DN134927 vs. ExPASy Swiss-Prot
Match: GBRL2_RAT (Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Rattus norvegicus GN=Gabarapl2 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.760e-36
Identity = 69/116 (59.48%), Postives = 91/116 (78.45%), Query Frame = 3
Query:  165 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGW 512
            K  FK +H LE R  ESA+IR KYPDR+PVIVEK   + + DIDK+KYLVP+D++V QF++++RKRI+L +EKAIF+FV  T+P +   M  +YE+ KDEDGFLY+ YSGENTFG+
Sbjct:    2 KWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF 117          
The following BLAST results are available for this feature:
BLAST of DN134927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_CANAL6.354e-4369.57Autophagy-related protein 8 OS=Candida albicans GN... [more]
ATG8_SCHPO8.299e-4371.19Autophagy-related protein 8 OS=Schizosaccharomyces... [more]
ATG8_PICST8.299e-4369.57Autophagy-related protein 8 OS=Pichia stipitis GN=... [more]
ATG8_PICAN1.416e-4270.43Autophagy-related protein 8 OS=Pichia angusta GN=A... [more]
ATG8_LODEL1.416e-4268.70Autophagy-related protein 8 OS=Lodderomyces elongi... [more]
ATG8_DEBHA1.849e-4269.57Autophagy-related protein 8 OS=Debaryomyces hansen... [more]
ATG8_ASHGO5.379e-4268.42Autophagy-related protein 8 OS=Ashbya gossypii GN=... [more]
ATG8_KLULA9.175e-4269.57Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
ATG8_DICDI1.014e-4070.43Autophagy-related protein 8 OS=Dictyostelium disco... [more]
GBRL2_RAT5.760e-3659.48Gamma-aminobutyric acid receptor-associated protei... [more]

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Properties
Property NameValue
Genbank descriptionwca03d11 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03d11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134927 ID=DN134927; Name=DN134927; organism=Citrus sinensis; type=EST; length=698bp
CTTAACAAAANNNNTCCTAAAATAACAAAATAAATTCTCCACAATCAACC
GATCAATCAATCAATCAATCAAATACCTTGAAACCCTACTAATTTCCTTC
TCTTCTCCGATCCACTTCTCGTGTTGTGTTGAAGAGTCATCGTAGCGTCA
GTTTCGCCATGGCCAAAAGTTCATTCAAGCTCGAGCATCCATTGGAGAGG
AGGCTGGCAGAATCTGCTCGCATTAGAGAGAAGTATCCTGACAGGATTCC
GGTGATTGTGGAGAAGGCTGAGAAGACTGATGTTCCTGACATTGACAAGA
AAAAATACCTTGTCCCAGCGGATTTATCTGTGGGACAATTTGTTTATGTT
GTCCGTAAAAGGATTAAGCTCAGTGCAGAAAAGGCCATATTTGTTTTTGT
TAAGAATACTTTACCTCCAACCGGTGCCTTGATGTCTGCTATATATGAGG
AAAACAAGGATGAAGATGGTTTTCTTTACATGACTTACAGTGGAGAGAAT
ACCTTCGGTTGGTCATTTTAAGAGCAAAGGCAACAAGCCATGTATCATAA
AATTTGAAAGTTGTATATTCTCAGTTGATCCCTTTTAAGCCATTCCCAGA
CATGTTCACTGATATCTTGTTTTTATTTTGGGTTGATTGCATCAGTTGAT
AGAAGTAACTCTCGTTAAAATTGGCCCTTAGCGGTAGATATTGAATGG
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