DN134923

Overview
NameDN134923
Unique NameDN134923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: KATG_SPHAL (Catalase-peroxidase OS=Sphingopyxis alaskensis GN=katG PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.454e-11
Identity = 48/122 (39.34%), Postives = 61/122 (50.00%), Query Frame = 3
Query:  282 DQLKSAREDIRELLKSTFCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASL-RFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ 635
            D LK+   D +    + + H  P  +R+ WH AGTY         RGGAN+   RF        N  L  A +L+ PIK KY   +++ADLF LA   AIE  GGP      GRVDV  PE+
Sbjct:   69 DDLKALMTDSQPWWPADYGHYGPFFIRMAWHAAGTY----RTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAGNVAIESMGGPVFGFGGGRVDVYEPER 186          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: KATG_BACHD (Catalase-peroxidase OS=Bacillus halodurans GN=katG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.185e-11
Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 3
Query:  276 DPDQLKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ 635
            D D LK   +D+R+L++ +       F H  P  +R+ WH AGTY   I +  R GG   + RF        N  L  A +L+ PIK KY   +++ADL  LA   AIE+ GGP I    GR D+  PE+
Sbjct:   63 DYDALK---QDVRDLMRDSQDWWPADFGHYGPFFIRMSWHAAGTY--RIGDG-RGGGGTGNQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKISWADLLVLAGNVAIEDMGGPVIGFGAGREDIWHPEE 186          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: KATG_GEOTN (Catalase-peroxidase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=katG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 48/123 (39.02%), Postives = 64/123 (52.03%), Query Frame = 3
Query:  300 REDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASL-RFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ 635
            +ED+R+L+  +       + H  P+ +R+ WH AGTY         RGGA+    RF        NA L  A +L+ PIK KY   +++ADLF LA   AIE  GG  I    GRVDV  PE+
Sbjct:   70 KEDLRKLMTESQDWWPADYGHYGPLFIRMAWHSAGTYRIG----DGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEE 188          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: KATG_BACST (Catalase-peroxidase OS=Bacillus stearothermophilus GN=katG PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 48/123 (39.02%), Postives = 64/123 (52.03%), Query Frame = 3
Query:  300 REDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASL-RFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ 635
            +ED+R+L+  +       + H  P+ +R+ WH AGTY         RGGA+    RF        NA L  A +L+ PIK KY   +++ADLF LA   AIE  GG  I    GRVDV  PE+
Sbjct:   70 KEDLRKLMTESQDWWPADYGHYGPLFIRMAWHSAGTYRIG----DGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEE 188          
BLAST of DN134923 vs. ExPASy Swiss-Prot
Match: KATG_THELT (Catalase-peroxidase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=katG PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.324e-11
Identity = 48/142 (33.80%), Postives = 73/142 (51.41%), Query Frame = 3
Query:  273 SDPDQLKSAR--------EDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGA-NASLRFEVELKHAANAGLVNALKLIQPIKDKY-SGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCP 641
            SD D LK  +        ED+++L+K++       F H  P+ +RL WH AG+Y  +      RGGA N S+RF   +    N  L  A++L+ PIK KY   +++ADL  LA   A+++ G   +    GR DV   ++ P
Sbjct:   38 SDYDYLKEVKTLDVDAVIEDLKKLMKTSQDWWPADFGHYGPLFIRLSWHSAGSYRIH----DGRGGAKNGSIRFPARINWPDNINLDKAIRLLWPIKKKYGKKLSWADLIILAGTVALQDMGVKILGFSLGREDVFEADESP 175          
The following BLAST results are available for this feature:
BLAST of DN134923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
KATG_SPHAL2.454e-1139.34Catalase-peroxidase OS=Sphingopyxis alaskensis GN=... [more]
KATG_BACHD4.185e-1137.69Catalase-peroxidase OS=Bacillus halodurans GN=katG... [more]
KATG_GEOTN7.139e-1139.02Catalase-peroxidase OS=Geobacillus thermodenitrifi... [more]
KATG_BACST7.139e-1139.02Catalase-peroxidase OS=Bacillus stearothermophilus... [more]
KATG_THELT9.324e-1133.80Catalase-peroxidase OS=Thermotoga lettingae (strai... [more]

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Properties
Property NameValue
Genbank descriptionwca03d03 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03d03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134923 ID=DN134923; Name=DN134923; organism=Citrus sinensis; type=EST; length=642bp
TACGGCCGGGGNNNCAACAGATACGACTGCAATCAAAATCACAATCACCG
ATGGCTTCCTCTTTGAGCACCGCCGCTTCTTCTCGCCTTCTTTGCTCCAC
CACCGCCGCCGCCGCAGCTGCTAAGCTTTCTTTCTCTTCCGCTTCTTCAC
TCTCTTTCTCTCTCTCCTCTTCTTCCTCCCTCAAATGCCTCAAATTCTCT
CCTCTCATCAGCCAGAGGAGATCGTCTGTGAACAGAGGATATAGCACCGT
ACCTACGACGAAATGTGCGGCGTCGGATCCTGATCAGTTGAAGAGTGCTA
GAGAAGATATTAGGGAGCTTCTCAAGTCTACATTTTGCCATCCTATTTTG
GTTCGTCTAGGATGGCATGATGCTGGTACTTATGACAAGAACATTGAGGA
GTGGCCTCGAAGGGGAGGAGCTAATGCAAGTCTTAGATTTGAGGTTGAGC
TAAAACACGCAGCCAATGCTGGGCTTGTGAATGCATTGAAACTGATTCAA
CCTATCAAGGACAAATATTCCGGTGTCACATATGCAGACTTATTCCAGTT
GGCTAGCGCTACTGCTATAGAGGAAGCCGGGGGTCCTAAGATCCCAATGA
AGTATGGAAGAGTGGATGTCTCAGGACCTGAGCAGTGCCCTG
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