DN134862

Overview
NameDN134862
Unique NameDN134862
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFU (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fuscata fuscata GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.113e-32
Identity = 80/170 (47.06%), Postives = 108/170 (63.53%), Query Frame = 2
Query:  158 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL 646
            G  +P++GFGT   A+ P   A EA K     AIE G+RH D+A +Y +EE +G AI   +  G +K R+++F TSKLW      + V PAL+ SLKNL L+++DLYLIHFPVSLKPG       E+     + +D    WEAME+C++ GL KSIGVSNF  ++LE +L
Sbjct:   13 GHFMPVLGFGTYAPAEVPKNKAIEATKL----AIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVK-REDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKPGEELIPKDENGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMIL 177          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFA (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fascicularis GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.113e-32
Identity = 80/170 (47.06%), Postives = 108/170 (63.53%), Query Frame = 2
Query:  158 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL 646
            G  +P++GFGT   A+ P   A EA K     AIE G+RH D+A +Y +EE +G AI   +  G +K R+++F TSKLW      + V PAL+ SLKNL L+++DLYLIHFPVSLKPG       E+     + +D    WEAME+C++ GL KSIGVSNF  ++LE +L
Sbjct:   13 GHFMPVLGFGTYAPAEVPKNKALEATKL----AIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVK-REDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKPGEELIPKDENGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMIL 177          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.604e-32
Identity = 74/168 (44.05%), Postives = 112/168 (66.67%), Query Frame = 2
Query:  158 GKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKED-----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL 646
            G  IP++GFGT      A  E +K + + AI+ G+RHFD+A +Y+ EE +G+AI   +  G +K R+++F TSKLW      +LV   L+ +LK+  L+++DLY+IHFP++L+PG  F F +++      E +D    WEAME+C++ GL KSIGVSNF C++LER+L
Sbjct:   13 GNFIPVLGFGTTVPEKVAKDEVIKATKI-AIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVK-REDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIF-FPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERIL 177          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: AK1C2_HUMAN (Aldo-keto reductase family 1 member C2 OS=Homo sapiens GN=AKR1C2 PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 3.604e-32
Identity = 80/170 (47.06%), Postives = 108/170 (63.53%), Query Frame = 2
Query:  158 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL 646
            G  +P++GFGT   A+ P   A EAVK     AIE G+ H D+A +Y +EE +G AI   +  G +K R+++F TSKLW      +LV PAL+ SLKNL L+++DLYLIHFPVS+KPG       E+     + +D    WEAME+C++ GL KSIGVSNF  + LE +L
Sbjct:   13 GHFMPVLGFGTYAPAEVPKSKALEAVKL----AIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVK-REDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMIL 177          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.707e-32
Identity = 72/167 (43.11%), Postives = 108/167 (64.67%), Query Frame = 2
Query:  158 GKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPG-TGFPFSKED---IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL 646
            G  IP++GFGTA  P        KE    AI+ G+ HFD+A++Y +E+ +GEAI   +  G ++ R+++F TSK+W    H +LV  +L+ SL+ L  +++DLYLIH+P++LKPG   FP  +      + +D    WEAME+C++ GLTKSIGVSNF  ++LE +L
Sbjct:   13 GNFIPVLGFGTA-LPLECPKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVR-REDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPGEENFPVDEHGKLIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMIL 177          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.707e-32
Identity = 79/170 (46.47%), Postives = 109/170 (64.12%), Query Frame = 2
Query:  158 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL 646
            G  +P++GFGT   A+ P   A EA K     AIE G+RH D+A +Y +EE +G AI   +  G +K R+++F TSKLW      +LV PAL+ SLKNL L+++DLYLIHFPVS+KPG       E+     + +D    WEA+E+C++ GL KSIGVSNF  ++LE +L
Sbjct:   13 GHFMPVLGFGTYAPAEVPKSKALEATKL----AIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVK-REDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMIL 177          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFA (Aldo-keto reductase family 1 member C4 OS=Macaca fascicularis GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.370e-31
Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 2
Query:  158 GKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKED-----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL 646
            G  +P++GFGT   P       V+ + + AIE G+RH D+A +Y +EE +G AI   +  G +K R+++F TSKLW      QLV PAL++SLK L L+++DLYLIHFP++LKPG   P  K++      + +D   +WEAME+C++ GL KSIGVSNF  ++LE +L
Sbjct:   13 GHFMPVLGFGTYAPPEVPRNRVVEVTKL-AIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVK-REDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFPMALKPGE-TPLPKDENGKVMFDTVDLCAIWEAMEKCKDAGLAKSIGVSNFNRRQLEMIL 177          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: DHB5_MOUSE (Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus GN=Akr1c6 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.789e-31
Identity = 77/173 (44.51%), Postives = 113/173 (65.32%), Query Frame = 2
Query:  152 STGKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGV-----WEAMEECQNLGLTKSIGVSNFACKKLERLL 646
            S G  IP++GFGT    + P   ATEA K     AI+ G+RH D+A++YQ+E+ +G AI   +  G +K R+++F TSK+W      +LV   L+ SLK L L+++DLYLIHFP+++KPG  +   K++   L Y+ V     WEAME+C++ GL KSIGVSNF  ++LE++L
Sbjct:   11 SDGHFIPILGFGTYAPQEVPKSKATEATKI----AIDAGFRHIDSASMYQNEKEVGLAIRSKIADGTVK-REDIFYTSKVWCTFHRPELVRVCLEQSLKQLQLDYVDLYLIHFPMAMKPGENY-LPKDENGKLIYDAVDICDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKIL 177          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: AK1C1_PONAB (Aldo-keto reductase family 1 member C1 homolog OS=Pongo abelii GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.789e-31
Identity = 75/164 (45.73%), Postives = 108/164 (65.85%), Query Frame = 2
Query:  167 IPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL 646
            +P++GFGT   P    ++A+ E+   AIE G+RH D+A +Y +EE +G AI   +  G +K R+++F TSKLW      +LV PAL+ SLKNL L+++DLYL+HFPVS+KPG       E+     + +D    WEAME+C++ GL KSIGVSNF  ++LE +L
Sbjct:   16 MPVLGFGTYAPPEVPKSKAL-EATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVK-REDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLVHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMIL 177          
BLAST of DN134862 vs. ExPASy Swiss-Prot
Match: AKC1H_MOUSE (Aldo-keto reductase family 1 member C18 OS=Mus musculus GN=Akr1c18 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.985e-31
Identity = 77/171 (45.03%), Postives = 108/171 (63.16%), Query Frame = 2
Query:  158 GKTIPLVGFGTAQFPFGAATEAVK----ESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL 646
            G +IP++GFGT      A  E +K    ES   AI+VG+ H D + +YQ+EE +G+AI   +  G +K R+++F TSKLW      +LV P+L+ SL+ L L+++DLYLIHFPVSLKPG       E      + +D    WEAME+C++ GL KSIGVSNF  ++LE +L
Sbjct:   13 GHSIPVLGFGTY-----ATEEHLKKKSMESTKIAIDVGFCHIDCSHLYQNEEEIGQAILSKIEDGTVK-REDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPGNELLPKDEHGNLIFDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEMIL 177          
The following BLAST results are available for this feature:
BLAST of DN134862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
AK1C1_MACFU2.113e-3247.06Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C1_MACFA2.113e-3247.06Aldo-keto reductase family 1 member C1 homolog OS=... [more]
DIDH_RAT3.604e-3244.053-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
AK1C2_HUMAN3.604e-3247.06Aldo-keto reductase family 1 member C2 OS=Homo sap... [more]
AK1CL_MOUSE4.707e-3243.11Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]
AK1C1_HUMAN4.707e-3246.47Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]
AK1C4_MACFA1.370e-3145.24Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
DHB5_MOUSE1.789e-3144.51Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus ... [more]
AK1C1_PONAB1.789e-3145.73Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AKC1H_MOUSE3.985e-3145.03Aldo-keto reductase family 1 member C18 OS=Mus mus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionwca02d09 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02d09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134862 ID=DN134862; Name=DN134862; organism=Citrus sinensis; type=EST; length=674bp
GCAAGTGGCGGCCCTTTTGCCCCCTAAGTTATGATATATATACACTCGCG
CATACATAAGTCGGCAGTGCAGCCCCGTGAGCCAAATGCACCTTGATTCC
TCTTCGTTGAAAATGAAAACAATGGTAAGCATCCCAGAGGCTCCTTTGGG
CTCCACCGGCAAAACCATACCTCTTGTTGGCTTCGGCACGGCCCAATTTC
CGTTCGGAGCAGCCACTGAAGCAGTAAAAGAATCCGTTGTGCATGCAATA
GAAGTCGGCTACAGACACTTCGACACCGCCGCAATATACCAGTCCGAGGA
GCCTCTTGGGGAAGCAATAGCCCAAGCGTTGCGTCTTGGGCTCATCAAAT
CACGCGATGAGCTCTTTATCACTTCAAAGCTTTGGTTCGGCCACGCACAC
CGTCAACTTGTCCTCCCTGCGCTACAAACTTCTCTCAAGAATCTGGGATT
GGAGCATATTGATTTGTATCTGATTCATTTTCCGGTAAGCTTGAAGCCTG
GAACAGGGTTCCCATTCAGTAAAGAAGATATTGAGCCACTTGATTATGAG
GGTGTTTGGGAGGCCATGGAGGAGTGTCAAAATCTCGGCCTCACTAAATC
CATTGGAGTCAGCAACTTTGCTTGCAAGAAACTTGAGAGGTTACTTGCTA
CTGCAAAAATCCCTCCTGCTGTCA
back to top