CX044085 | Citrus Genome Database

Overview


Name	CX044085
Unique Name	CX044085
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	817

Libraries


Library Name	Type
Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX044085 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.680e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = -1

Query:  446 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 673
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.51 bits (358), Expect = 2.680e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = -1

Query:  218 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 445
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.1301 bits (235), Expect = 4.908e-19
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = -1

Query:  674 KIQDKEGIPPDQQRVIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 817
            KIQDKEGIPPDQQR+IFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   29 KIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CX044085 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.622e-32
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = -1

Query:  446 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 673
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 137.502 bits (345), Expect = 8.622e-32
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = -1

Query:  218 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 445
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 92.4337 bits (228), Expect = 3.181e-18
Identity = 44/48 (91.67%), Postives = 47/48 (97.92%), Query Frame = -1

Query:  674 KIQDKEGIPPDQQRVIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 817
            KIQDKEGIPPDQQR+IFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   29 KIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CX044085 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.428e-28
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = -1

Query:  446 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 673
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 125.176 bits (313), Expect = 4.428e-28
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = -1

Query:  218 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 445
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 85.8853 bits (211), Expect = 2.977e-16
Identity = 40/48 (83.33%), Postives = 45/48 (93.75%), Query Frame = -1

Query:  674 KIQDKEGIPPDQQRVIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 817
            KI DKEG+P DQQR+I+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:   29 KIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

[Close]

BLAST of CX044085 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.288e-27
Identity = 58/77 (75.32%), Postives = 69/77 (89.61%), Query Frame = -1

Query:  215 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 445
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG+
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 77

HSP 2 Score: 122.479 bits (306), Expect = 2.870e-27
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = -1

Query:  446 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 673
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 86.6557 bits (213), Expect = 1.745e-16
Identity = 40/48 (83.33%), Postives = 45/48 (93.75%), Query Frame = -1

Query:  674 KIQDKEGIPPDQQRVIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 817
            KI DKEG+P DQQR+IFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:   29 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

[Close]

BLAST of CX044085 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.091e-26
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = -1

Query:  452 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 640
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 2 Score: 120.553 bits (301), Expect = 1.091e-26
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = -1

Query:  224 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 412
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 3 Score: 92.0485 bits (227), Expect = 4.154e-18
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = -1

Query:  680 KIQDKEGIPPDQQRVIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 817
            KIQDKEGIPPDQQR+IFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:   18 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

[Close]

BLAST of CX044085 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 6.848e-21
Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = -1

Query:  215 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 439
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGGF
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 77

HSP 2 Score: 98.9821 bits (245), Expect = 3.399e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = -1

Query:  446 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 667
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 68.1662 bits (165), Expect = 6.424e-11
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = -1

Query:  674 KIQDKEGIPPDQQRVIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 817
            ++++KEGIPP QQR+I+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   29 RVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of CX044085 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.168e-20
Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = -1

Query:  215 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 439
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 77

HSP 2 Score: 99.3673 bits (246), Expect = 2.602e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = -1

Query:  446 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 667
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 68.1662 bits (165), Expect = 6.424e-11
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = -1

Query:  674 KIQDKEGIPPDQQRVIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 817
            ++++KEGIPP QQR+I+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   29 RVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of CX044085 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.526e-20
Identity = 47/75 (62.67%), Postives = 60/75 (80.00%), Query Frame = -1

Query:  215 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 439
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 77

HSP 2 Score: 98.9821 bits (245), Expect = 3.399e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = -1

Query:  446 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 667
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 68.1662 bits (165), Expect = 6.424e-11
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = -1

Query:  674 KIQDKEGIPPDQQRVIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 817
            ++++KEGIPP QQR+I+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   29 RVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of CX044085 vs. ExPASy Swiss-Prot
Match: NEDD8_CAEEL (NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.602e-20
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = -1

Query:  215 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 445
            M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY +   S LHLVL LRGGF
Sbjct:    1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGGF 77

HSP 2 Score: 97.0561 bits (240), Expect = 1.291e-19
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = -1

Query:  446 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 673
            M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY +   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76

HSP 3 Score: 68.5514 bits (166), Expect = 4.919e-11
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = -1

Query:  674 KIQDKEGIPPDQQRVIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 817
            K+++KEGIPP QQR+IFAGKQ+ D +T ADY +   S LHLVL LRGG
Sbjct:   29 KVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76

[Close]

BLAST of CX044085 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.399e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = -1

Query:  446 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 667
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.9821 bits (245), Expect = 3.399e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = -1

Query:  218 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 439
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 68.1662 bits (165), Expect = 6.424e-11
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = -1

Query:  674 KIQDKEGIPPDQQRVIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 817
            ++++KEGIPP QQR+I+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   29 RVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

The following BLAST results are available for this feature:

BLAST of CX044085 vs. ExPASy Swiss-Prot

BLAST of CX044085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_LEIMA	2.680e-33	93.42	Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1	[more]
UBIQ_LEITA	8.622e-32	90.79	Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3...	[more]
UBIL_NPVOP	4.428e-28	80.26	Ubiquitin-like protein OS=Orgyia pseudotsugata mul...	[more]
UBIL_NPVAC	1.288e-27	75.32	Ubiquitin-like protein OS=Autographa californica n...	[more]
UBIQ_LUMTE	1.091e-26	95.24	Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ...	[more]
RUB1_ARATH	6.848e-21	64.00	NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN...	[more]
RUB1_DESAN	1.168e-20	64.00	NEDD8-like protein RUB1 OS=Deschampsia antarctica ...	[more]
RUB1_ORYSJ	1.526e-20	62.67	NEDD8-like protein RUB1 OS=Oryza sativa subsp. jap...	[more]
NEDD8_CAEEL	2.602e-20	61.04	NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1	[more]
RUB2_ORYSJ	3.399e-20	63.51	NEDD8-like protein RUB2 OS=Oryza sativa subsp. jap...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS07_15C05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15C05-E9-1-5.b, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX044085 ID=CX044085; Name=CX044085; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTTTTTATTCAAGAAAAAGATTCTTAGATATTATAATGG
GACGTTAGTGGGACCATATCAATATCTTAGAAACAGAGTTCAACTACCAC
AAACCAAAATAAACTTCAAATAGTTATTTAAGCTATTTCACCAATAGCCA
GCAAACATTAACCAAGACAAACCGAAGCAAATAAGACACACACACACCCA
GATGACCAAACTCAGAAACCTCCACGGAGTCGGAGCACAAGATGCAGAGT
GGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCATCCTCAAGTT
GTTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATCCCCTCCTTA
TCCTGGATCTTAGCCTTCACATTGTCAATTGTGTCCGAACTCTCAACCTC
CAACGTGATGGTTTTCCCAGTGAGTGTCTTCACAAAAATCTGCATACCAC
CACGGAGGCGAAGAACCAAGTGAAGAGTGGATTCTTTCTGGATGTTATAG
TCTGCAAGAGTCCTTCCATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCT
CTGCTGATCTGGTGGGATACCCTCCTTGTCTTGAATTTTTGCTTTCACGT
TGTCAATGGTGTCAGAACTTTCAACCTCAAGAGTAATTGTTTTTCCGGTG
AGGGTTTTCACAAAGATCTGCATGCCACCACGGAGACGAAGCACCAAATG
GAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCATCTT
CAAGTTGTTTGCCGGCAAAGATTACCCTCTGTTGATCAGGTGGGATGCCC
TCCTTGTCCTGAATCTT