CX044067
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPB_PROMA (Chaperone protein clpB OS=Prochlorococcus marinus GN=clpB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.816e-28 Identity = 64/155 (41.29%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 467 GRLTD KG+ ++FKNT++I+TSNVGS I ++ K + Y I+ +V +LK YF+PEFLNRLDE I+F+ L K ++K+I + + +V RLK K +E++ GYNP YGARP++R I LE +A+ +L + +E Sbjct: 704 GRLTDGKGKNINFKNTIIILTSNVGSESI----------IEMTNKKNEYELIEEVVRNQLKNYFKPEFLNRLDEQIIFKSLKKEDLKKIVKLQIDKVKARLKDKGLEIELNEKVIDWIADKGYNPIYGARPIKRIIQTKLETKLAKMILKSKSEE 848
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.803e-28 Identity = 67/149 (44.97%), Postives = 98/149 (65.77%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKML 449 G LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + S Y ++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + GY+P YGARPL RAI + +ED+++E +L Sbjct: 637 GHLTDTKGRTVDFRNTVIIMTSNVGAQELQDQ-RFAGFG--GASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELIL 782
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.803e-28 Identity = 67/149 (44.97%), Postives = 98/149 (65.77%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKML 449 G LTD+KGRTVDF+NT++IMTSNVG+ ++ R GF + S Y ++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + GY+P YGARPL RAI + +ED+++E +L Sbjct: 637 GHLTDTKGRTVDFRNTVIIMTSNVGAQELQDQ-RFAGFG--GASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELIL 782
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.803e-28 Identity = 65/155 (41.94%), Postives = 99/155 (63.87%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 467 GRLTD +GRTVDF+NT++IMTSN+GS I++ G S Y R+K++VTE LK+ F+PEFLNR+DE++++ L ++K+I DI ++ + RL + I L+ GY+P+YGARPL+R I R ++D +A +L + +E Sbjct: 703 GRLTDGQGRTVDFRNTVIIMTSNLGSQWIQQYG------------SSDYARMKAMVTETLKEGFKPEFLNRIDEIVIYHALPLEQIKKIVDIQVECLKQRLADRRIVLELSDKAREYLSREGYDPAYGARPLKRTIQRKIQDPLALALLEGKFQE 845
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: HLYB_TREHY (Hemolysin B OS=Treponema hyodysenteriae GN=tlyB PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.193e-28 Identity = 68/155 (43.87%), Postives = 103/155 (66.45%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 467 G+LTD+ GR VDF NT++I+TSN+G+ I KG +GF+ EKD+ N IK+ EELKQ F PEFLNR+D++IVF L+K ++K+I +IMLKE+ + +K ++I + G++ YGAR LRRAI + +ED ++ ++L I++ Sbjct: 646 GQLTDNFGRKVDFSNTIIIITSNLGARDIVKGSS-LGFNAVGSEKDA--NDIKNFALEELKQNFNPEFLNRIDDIIVFHTLSKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQKEIEDYVSTEILFGNIED 797
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFA (Chaperone protein clpB OS=Xylella fastidiosa GN=clpB PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.193e-28 Identity = 63/150 (42.00%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLA 452 GRLTD +GRTVDF+NT+++MTSN+GS I+ +L D+ Y ++K+ V E ++ +FRPEF+NRLD+++VF L K ++K+IA I L+ + RL +++L G++P YGARPL+RAI LE+ +A+++LA Sbjct: 697 GRLTDGQGRTVDFRNTVIVMTSNLGSHQIQ--------ELSGDDSPEVYTQMKAAVMEVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLQGLEKRLAESELKLDLDDRALELLGNVGFDPVYGARPLKRAIQSQLENPLAQQILA 838
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPB_AGRT5 (Chaperone protein clpB OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=clpB PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 8.193e-28 Identity = 66/155 (42.58%), Postives = 98/155 (63.23%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 467 GRLTD +GRTVDFKNT++IMTSN+GS + + G D D+ DS ++ LV E ++ +FRPEFLNR+D++I+F +L + E+ I +I LK + L + I L+ GY+P+YGARPL+R I + ++D +AE +L EI + Sbjct: 699 GRLTDGQGRTVDFKNTIIIMTSNLGSEFMTQMG-------DNDDVDS----VRELVMERVRSHFRPEFLNRIDDIILFHRLRRDEMGAIVEIQLKRLVSLLADRKITLELDEDARSWLANKGYDPAYGARPLKRVIQKSVQDRLAEMILGGEIPD 842
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 8.193e-28 Identity = 67/155 (43.23%), Postives = 94/155 (60.65%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 467 GR+TDS+GRTVDFKNT+LI+TSN+GS I LD DS Y ++S VTE L+ FRPEFLNR+DE I+F L K ++++I I L + +RL + + L G++P YGARPL+R I R LE ++A+ +L + + Sbjct: 703 GRVTDSRGRTVDFKNTILILTSNIGSQYI----------LDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQRELETAIAKAILRGQFSD 847
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPC_STAS1 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.070e-27 Identity = 66/149 (44.30%), Postives = 99/149 (66.44%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKML 449 G LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + +D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+K+I +M+ ++ +RL +DI + GY+P YGARPL RAI + +ED+++E +L Sbjct: 637 GHLTDTKGRRVDFRNTVIIMTSNVGAQELQDQ-RFAGFGGATEGQD--YESIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKQIVTMMVNKLTNRLSEQDINISVTEAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELIL 782
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPC_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.397e-27 Identity = 67/149 (44.97%), Postives = 97/149 (65.10%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKML 449 G LTD+KGR VDF+NT++IMTSNVG+ ++ R GF + D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+ ++ RL +DI + GY+P YGARPL RAI + +ED+++E +L Sbjct: 637 GHLTDTKGRQVDFRNTVIIMTSNVGAQELQDQ-RFAGFGGGSEGHD--YETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKDELKEIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELIL 782 The following BLAST results are available for this feature:
BLAST of CX044067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044067 ID=CX044067; Name=CX044067; organism=Citrus sinensis; type=EST; length=863bpback to top |