DN134828

Overview
NameDN134828
Unique NameDN134828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134828 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 5.780e-31
Identity = 70/169 (41.42%), Postives = 103/169 (60.95%), Query Frame = 3
Query:   81 KDRVEMATSNSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIA-KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG 584
            K R++ + + S  G +     +   Y+LGR LG G+F +V +A +  TG  +A               E+++REI ++++  H HI+ L+EV+ + + IY  M+ V  GELF+ I  KGRL+ED AR +FQQ+IS V++CH   V HRDLKPENLLLD   N+K+ DFG
Sbjct:   21 KSRMDGSGTGSRSGVES----ILPNYKLGRTLGIGSFGRVKIAEHALTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYLVMEYVNSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFG 185          
BLAST of DN134828 vs. ExPASy Swiss-Prot
Match: AMPKA_DICDI (5'-AMP-activated serine/threonine-protein kinase catalytic subunit alpha OS=Dictyostelium discoideum GN=snfA PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.747e-30
Identity = 70/157 (44.59%), Postives = 98/157 (62.42%), Query Frame = 3
Query:  120 GGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN-LKVTDFG 584
            GG ++ + + G Y L + LG G+F KV LA +++TG  +A               E+I+REI  MK+ +H HI++L+EV+ + + I+  M+ V GGELF  I K G+L ED +R  FQQ+IS VD+CH   V HRDLKPENLLLD     +K+ DFG
Sbjct:   19 GGIEKSSQIIGNYRLDKTLGIGSFGKVKLAEHIRTGVKVAIKILNRTKIKNLKMDEKIRREIQNMKLFRHPHIIKLYEVIETTTDIFMVMEYVTGGELFEYIVKNGKLLEDESRRLFQQMISGVDYCHHHMVVHRDLKPENLLLDPINKCIKIADFG 175          
BLAST of DN134828 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.410e-29
Identity = 66/160 (41.25%), Postives = 101/160 (63.12%), Query Frame = 3
Query:  108 NSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNK-IAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG 584
            NS    D++P +  G Y L + +G G FAKV LAR++ TGK +A               +++ RE+ +MK++ H +IV+L EV+ ++  +Y  M+   GGE+F+  +A GR++E  AR  F+Q++SAV +CH + + HRDLK ENLLLD D N+K+ DFG
Sbjct:   39 NSATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 195          
BLAST of DN134828 vs. ExPASy Swiss-Prot
Match: MARK2_MOUSE (Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 5.410e-29
Identity = 66/160 (41.25%), Postives = 101/160 (63.12%), Query Frame = 3
Query:  108 NSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNK-IAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG 584
            NS    D++P +  G Y L + +G G FAKV LAR++ TGK +A               +++ RE+ +MK++ H +IV+L EV+ ++  +Y  M+   GGE+F+  +A GR++E  AR  F+Q++SAV +CH + + HRDLK ENLLLD D N+K+ DFG
Sbjct:   39 NSATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 195          
BLAST of DN134828 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.410e-29
Identity = 66/160 (41.25%), Postives = 101/160 (63.12%), Query Frame = 3
Query:  108 NSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNK-IAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG 584
            NS    D++P +  G Y L + +G G FAKV LAR++ TGK +A               +++ RE+ +MK++ H +IV+L EV+ ++  +Y  M+   GGE+F+  +A GR++E  AR  F+Q++SAV +CH + + HRDLK ENLLLD D N+K+ DFG
Sbjct:   39 NSATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 195          
BLAST of DN134828 vs. ExPASy Swiss-Prot
Match: MARK1_HUMAN (Serine/threonine-protein kinase MARK1 OS=Homo sapiens GN=MARK1 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.205e-28
Identity = 65/178 (36.52%), Postives = 106/178 (59.55%), Query Frame = 3
Query:   54 YIYTYKRKKKDRVEMATSNSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNK-IAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG 584
            +I   K   +  +    ++     D++P +  G Y L + +G G FAKV LAR++ TG+ +A               +++ RE+ +MK++ H +IV+L EV+ ++  +Y  M+   GGE+F+  +A GR++E  AR  F+Q++SAV +CH + + HRDLK ENLLLD D N+K+ DFG
Sbjct:   28 HIQPTKSSSRQNIPRCRNSITSATDEQPHI--GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSL-QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFG 202          
BLAST of DN134828 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.574e-28
Identity = 64/154 (41.56%), Postives = 100/154 (64.94%), Query Frame = 3
Query:  126 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNK-IAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG 584
            D++P +  G Y L + +G G FAKV LAR++ TG+ +A               +++ RE+ +MK++ H +IV+L EV+ ++  +Y  M+   GGE+F+  +A GR++E  AR  F+Q++SAV +CH + + HRDLK ENLLLD D N+K+TDFG
Sbjct:   48 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL-QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKITDFG 198          
BLAST of DN134828 vs. ExPASy Swiss-Prot
Match: MARK1_RAT (Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.574e-28
Identity = 64/173 (36.99%), Postives = 104/173 (60.12%), Query Frame = 3
Query:   69 KRKKKDRVEMATSNSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNK-IAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG 584
            K   +  +    ++     D++P +  G Y L + +G G FAKV LAR++ TG+ +A               +++ RE+ +MK++ H +IV+L EV+ ++  +Y  M+   GGE+F+  +A GR++E  AR  F+Q++SAV +CH + + HRDLK ENLLLD D N+K+ DFG
Sbjct:   33 KSSSRQNIPRCRNSITSATDEQPHI--GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSL-QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFG 202          
BLAST of DN134828 vs. ExPASy Swiss-Prot
Match: MARK1_MOUSE (Serine/threonine-protein kinase MARK1 OS=Mus musculus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.574e-28
Identity = 64/173 (36.99%), Postives = 104/173 (60.12%), Query Frame = 3
Query:   69 KRKKKDRVEMATSNSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNK-IAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG 584
            K   +  +    ++     D++P +  G Y L + +G G FAKV LAR++ TG+ +A               +++ RE+ +MK++ H +IV+L EV+ ++  +Y  M+   GGE+F+  +A GR++E  AR  F+Q++SAV +CH + + HRDLK ENLLLD D N+K+ DFG
Sbjct:   33 KSSSRQNIPRCRNSITSATDEQPHI--GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSL-QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFG 202          
BLAST of DN134828 vs. ExPASy Swiss-Prot
Match: SNF1_CANAL (Carbon catabolite-derepressing protein kinase OS=Candida albicans GN=SNF1 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.685e-28
Identity = 61/146 (41.78%), Postives = 99/146 (67.81%), Query Frame = 3
Query:  150 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIA-KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG 584
            G+Y++ + LG G+F KV LA++L TG+ +A                +++REIS +++++H HI++L++V+ SK +I   ++   G ELF+ I  +G++ ED AR +FQQ+I+AV++CH   + HRDLKPENLLLD+  N+K+ DFG
Sbjct:   51 GRYQILKTLGEGSFGKVKLAQHLGTGQKVALKIINRKTLAKSDMQGRVEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEFA-GKELFDYIVQRGKMPEDEARRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLNVKIADFG 195          
The following BLAST results are available for this feature:
BLAST of DN134828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KIN10_ARATH5.780e-3141.42SNF1-related protein kinase catalytic subunit alph... [more]
AMPKA_DICDI3.747e-3044.595'-AMP-activated serine/threonine-protein kinase c... [more]
MARK2_RAT5.410e-2941.25Serine/threonine-protein kinase MARK2 OS=Rattus no... [more]
MARK2_MOUSE5.410e-2941.25Serine/threonine-protein kinase MARK2 OS=Mus muscu... [more]
MARK2_HUMAN5.410e-2941.25Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]
MARK1_HUMAN1.205e-2836.52Serine/threonine-protein kinase MARK1 OS=Homo sapi... [more]
MARK3_RAT1.574e-2841.56MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
MARK1_RAT1.574e-2836.99Serine/threonine-protein kinase MARK1 OS=Rattus no... [more]
MARK1_MOUSE1.574e-2836.99Serine/threonine-protein kinase MARK1 OS=Mus muscu... [more]
SNF1_CANAL2.685e-2841.78Carbon catabolite-derepressing protein kinase OS=C... [more]

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Properties
Property NameValue
Genbank descriptionwca01h03 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01h03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134828 ID=DN134828; Name=DN134828; organism=Citrus sinensis; type=EST; length=621bp
TACGGCCGGGACAAAGNNNACNNNGAAAGAATTATTTAATTAGCTAAACT
TGGTACATATATACGTATAAAAGGAAAAAAAAAGACCGCGTGGAGATGGC
TACATCAAACAGTAACGGCGGAGGCGATGACAGGCCGACGTTGCTACATG
GGAAATACGAGCTGGGGCGTATGCTAGGCCACGGAACCTTCGCGAAGGTG
TACCTGGCAAGAAATTTGCAGACGGGGAAAAGCATGGCCATGAAAGTTGT
TGGTAAAGACAAGGTTATCAAGGTGGGCATGATGGAGCAAATCAAGCGTG
AAATCTCTGTCATGAAGATGGTGAAGCACAAGCACATAGTTGAGCTACAC
GAAGTCATGGCAAGTAAGTCCAAGATTTACTTCGCCATGGACCTCGTCAA
AGGCGGCGAGCTGTTCAACAAGATTGCCAAAGGAAGATTACGAGAAGATG
TTGCAAGGGTTTATTTCCAGCAGCTGATTTCAGCCGTTGATTTCTGCCAC
AGCCGCGGCGTTTATCACCGCGACTTGAAGCCTGAGAATCTCTTGCTAGA
CGAAGATGGTAACTTGAAGGTCACGGATTTTGGCGCTGAGTGCTTTCTCT
GAGCATTTGAAGCAAGATGGT
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