CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG3_MOUSE (ATP-binding cassette sub-family G member 3 OS=Mus musculus GN=Abcg3 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.839e-22 Identity = 70/195 (35.90%), Postives = 111/195 (56.92%), Query Frame = 3 Query: 207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQ 788 L ++G +PG L AIMGP +S LLD LA R +G+ILING+ R + TS YV Q+D ++ T+TV + + +SA L+LP T+T+ +K+ R ++ + L N K S ++R SI +E++T +LFLD+PT+GLD + V+ + ++ ++ RTII SI+QP +F+ Sbjct: 64 LSNISGIMKPG-LNAIMGPQDGSRSLLLDVLAARRDPRGL-SGDILINGKPRPANFKCTSGYVPQNDVVLGTVTVRDNLEFSAALRLPVTITRDEKRRRINEVLELLHLNKEQN-------IKPRSKELRKRTSIAMELVTEHPILFLDDPTTGLDLRTTTDVILVLRRMSKK-----GRTIIFSINQPQYSIFK 244
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PDR1_SCHPO (ATP-binding cassette transporter pdr1 OS=Schizosaccharomyces pombe GN=pdr1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.999e-18 Identity = 74/242 (30.58%), Postives = 121/242 (50.00%), Query Frame = 3 Query: 72 ESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRP-KLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 ++ +NK S ++ +D + L W+DL TV K + IL ++GY + L A++G + GKS LL L+ R G GEI ++G K YV ++ I+ TV E + A L+ + ++ E I +GL + + +G G KGLS KR +SI +E+ RP +L LDEP +GLDS +++ ++ + KL + +I+ S+ QPSS + +L Sbjct: 736 QTEPDNKKVDVSTTLSTNDN--LVLCWRDLNFTVVT--KTSKKQILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQR-GIAGSVEGEITLSGLKNPKNLRKRIGYVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVEYVIDFLGLGEVADFIVGDMG-KGLSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAWMLVCILQKLAR-----SGLSILCSVSQPSSRILEL 966
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y1508_METJA (Uncharacterized ABC transporter ATP-binding protein MJ1508 OS=Methanocaldococcus jannaschii GN=MJ1508 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.330e-17 Identity = 69/205 (33.66%), Postives = 102/205 (49.76%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA---------LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 G+ + L+ + GE + IMGPSGCGKSTLL+ LA +T GE+ GR+ + S ++ Q LI TLT E V L D K +++RA+ ++ +GL D +N LSGGQ++RV+I + PK++F DEPT LDS + VMS + L+++ G+ TII H+ Sbjct: 12 GKGEAKTIALKNINLKIEEGEFVMIMGPSGCGKSTLLNILALL---DTPTKGEVYYKGRRTSSMSENERAIFRRKISGFIFQQFHLIKTLTALENVELPMML---DERDKSYRRKRAKKLLEMVGLGDRLNHY-----PHQLSGGQQQRVAIARALANNPKIIFADEPTGNLDSKSGMAVMSILKGLNEK--GI---TIIMVTHE 200
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: BCEA_BACSU (Bacitracin export ATP-binding protein bceA OS=Bacillus subtilis GN=bceA PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.386e-17 Identity = 67/209 (32.06%), Postives = 109/209 (52.15%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING------RKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKE---RAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 G K + +L+G+ + GE ++IMG SG GK+TLL+ L+ + G I ING +++ LA ++ QD L+ TLTV E + LP ++TKL KKE + E KE+G+ + + +SGGQK+R S + P ++F DEPT LDS ++ +++++++L+Q+ + TII H P Sbjct: 14 GNKLNKQEVLKGIDIHIEKGEFVSIMGASGSGKTTLLNVLSS---IDQVSHGTIHINGNDMTAMKEKQLAEFRKQHLGFIFQDYNLLDTLTVKENIL------LPLSITKLSKKEANRKFEEVAKELGIYELRDKY-----PNEISGGQKQRTSAGRAFIHDPSIIFADEPTGALDSKSASDLLNKLSQLNQKRNA----TIIMVTHDP 204
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YBD4_ENCCU (ABC transporter-like protein ECU11_1340 OS=Encephalitozoon cuniculi GN=ECU11_1340 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.807e-16 Identity = 68/227 (29.96%), Postives = 116/227 (51.10%), Query Frame = 3 Query: 144 LTWQDLWVTVPDGQKKGNRS---ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKR---ALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNT-RIGGWGAKGLSGGQKRRVSIC---IEMLT---RPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785 L + + + VP+ N ++ GLT + G + A MG SG GK+T L+ +AG + S +R G IL++G++R Y AY Q +I LTV E VYY LP+ + KER + E+ L++ +N I K +SGG+++R ++ +ML K++ LDEPTS LD+ + + + +R + + ++ ++HQP +E++ Sbjct: 6 LQLEGVTLDVPNQNLSSNEKYARLINGLTADFKSGNVYAFMGTSGSGKTTTLETIAGLVPSGSRTGGRILVDGQERNPDEFPY-EFAYGDQLGYIIDELTVEEFVYYYVVSSLPE-----ESKERVREKMDEV-LENLLNIGHIRHNKMKNISGGEQKRANLARTFTKMLLLEGELKVVLLDEPTSELDAGLALKLGEFLRDYARRSNSI----VLVTVHQPGAELY 221
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_ECO57 (Taurine import ATP-binding protein tauB OS=Escherichia coli O157:H7 GN=tauB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.807e-16 Identity = 59/176 (33.52%), Postives = 92/176 (52.27%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 G + +L+ + GELL ++GPSGCGK+TLL+ +AG + Q G I + G++ V Q++ L+ V + V + QL + K+Q+ E A +K++GL+ A I W LSGGQ++RV I + P+LL LDEP LD+ + + + KL Q Sbjct: 12 GGKPVLEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GIEKMQRLEIAHQMLKKVGLEGAEKRYI--W---QLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQ 176
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_PSESM (Phosphonates import ATP-binding protein phnC 2 OS=Pseudomonas syringae pv. tomato GN=phnC2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.787e-16 Identity = 62/207 (29.95%), Postives = 105/207 (50.72%), Query Frame = 3 Query: 195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILI-----------NGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 N+S L L +PGE++A++G SG GKSTLL LAG + G++ + NG+ R L Y+ Q L+ L+V + V ++P L ++K+RA + + +GL D R A LSGGQ++RV+I + R +++ DEP + LD ++ VM +A ++++D +T++ ++HQ Sbjct: 16 NKSALLDLALSIQPGEMVALIGASGSGKSTLLRHLAGLACCDRSNGGQVQVLGREVQSSGRLNGQVRRLR-ADIGYIFQQFNLVNRLSVMDNVLIGCLGRMPRWRGSLGLFNREEKQRAMVALDRVGLADLAAQR-----ASTLSGGQQQRVAIARALTQRAEVILADEPIASLDPESARRVMEILADINRQD----GKTVVVTLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_SHIBS (Taurine import ATP-binding protein tauB OS=Shigella boydii serotype 4 (strain Sb227) GN=tauB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.252e-16 Identity = 59/176 (33.52%), Postives = 91/176 (51.70%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 G + L+ + GELL ++GPSGCGK+TLL+ +AG + Q G I + G++ V Q++ L+ V + V + QL + K+Q+ E A +K++GL+ A I W LSGGQ++RV I + P+LL LDEP LD+ + + + KL Q Sbjct: 12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GIEKMQRLEIAHQVLKKVGLEGAEKRYI--W---QLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQ 176
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_SHISS (Taurine import ATP-binding protein tauB OS=Shigella sonnei (strain Ss046) GN=tauB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.166e-16 Identity = 59/176 (33.52%), Postives = 91/176 (51.70%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 G + L+ + GELL ++GPSGCGK+TLL+ +AG + Q G I + G++ V Q++ L+ V + V + QL + K+Q+ E A +K++GL+ A I W LSGGQ++RV I + P+LL LDEP LD+ + + + KL Q Sbjct: 12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GIEKMQRLEIAHQMLKKVGLEGAEKRYI--W---QLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQ 176
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_ECOLI (Taurine import ATP-binding protein tauB OS=Escherichia coli (strain K12) GN=tauB PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.166e-16 Identity = 59/176 (33.52%), Postives = 91/176 (51.70%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 G + L+ + GELL ++GPSGCGK+TLL+ +AG + Q G I + G++ V Q++ L+ V + V + QL + K+Q+ E A +K++GL+ A I W LSGGQ++RV I + P+LL LDEP LD+ + + + KL Q Sbjct: 12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GIEKMQRLEIAHQMLKKVGLEGAEKRYI--W---QLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQ 176 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |